Pairwise Alignments

Query, 397 a.a., efflux protein from Sinorhizobium meliloti 1021

Subject, 388 a.a., Arabinose efflux permease from Enterobacter asburiae PDN3

 Score =  276 bits (705), Expect = 1e-78
 Identities = 151/387 (39%), Positives = 234/387 (60%), Gaps = 5/387 (1%)

Query: 5   IFALTIAAYAIGTTEFVIVGLLPTVATDLAITLPLAGLIVSVYALGVTFGAPVLTALTGR 64
           + AL I A+ IGTTEF  +GLLP +A  + +++P AG+++S YA+GV  GAP++T L   
Sbjct: 7   LLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAIGVMVGAPLMTLLLSH 66

Query: 65  IERKPLLLGLMALFIGGNTAAALSPNYEVLLVARVLSAFAHGVFFSVGSTIAADLVPENR 124
             R+  L+ LMA+F  GN  +A+SP+Y  L+++R+L++  HG FF +GS +AA +VP+++
Sbjct: 67  RARRNALIFLMAIFTLGNVLSAISPDYTTLMLSRILTSLNHGAFFGLGSVVAASVVPKHK 126

Query: 125 RASAIAMMFMGLTVAIVTGVPIGTYIGQVFGWRATFWGVSGLGVVAFAGIATLLPGTLAK 184
           +ASA+A MFMGLT+A + GVP  T++G+  GWR +F   +GLGVVA   +   LP   A 
Sbjct: 127 QASAVATMFMGLTIANIGGVPAATWLGEAIGWRMSFLATAGLGVVAMVALFFSLPKGSAG 186

Query: 185 AAPASLLDQVRVLGSGRLLIVFAMTALGYGGTFVAFTFLAPILQEVTGFSERSVSLILVL 244
             P  +  ++ VL   ++L     T LG G  F  +T+++P+L ++T  +   V+ +LVL
Sbjct: 187 ERP-DVRRELSVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLHDITHATPLFVTAMLVL 245

Query: 245 YGVAIAIGNIAGGRIANTNPVKALIGLFLLQALVLVIFSFTAVSPVLTLVTLAALGFLSF 304
            GV  +IGN  GG+ A+ +    L G   L  +++V   + A +     + +   G  +F
Sbjct: 246 IGVGFSIGNYLGGKFADRSVSGTLKGFLTLLIVIMVAIPWLARNEFGAAIAMVVWGAATF 305

Query: 305 ANVPGLQLYVVQLAMEHRPGAVDVASALNIAAFNLGIALGAWLGGMVVDSPFGLSATPWV 364
           A VP LQ+ V+++A E    A  ++S++NI AFNLG ALGA  GG V+    G S  P +
Sbjct: 306 AVVPPLQMRVMRVAHE----APGLSSSVNIGAFNLGNALGAAAGGAVISGGLGYSFVPVM 361

Query: 365 GAILVSGALLLTLWSGVLDRRGAVSGE 391
           GAI+ +  LLL + SG      A + E
Sbjct: 362 GAIIAALGLLLVMMSGRKQPEAACAAE 388