Pairwise Alignments

Query, 398 a.a., ISRm5 transposase from Sinorhizobium meliloti 1021

Subject, 407 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score =  169 bits (427), Expect = 2e-46
 Identities = 107/371 (28%), Positives = 180/371 (48%), Gaps = 13/371 (3%)

Query: 6   GRTASAAVKDILLSNPDGLREVIRTVMQE-VLEAEMDEALGAAKGERTPERLGYRSGHYG 64
           G  ASAA +        GL + ++  + E  L AEMD  L    G         R+G+  
Sbjct: 20  GGAASAAFEQ------GGLLDSLKKALTERALNAEMDHHLAGEDGAGN-----MRNGYGR 68

Query: 65  RTLITRVGKLELRVPQDRSGHFSTELFERYQRSERALVATLAEMYVQGVSTRKVKAITEE 124
           +T++T  GKL + VP+DR   F  +L  +YQR        +  MY +G+STR++     +
Sbjct: 69  KTVMTDTGKLAIDVPRDRQSSFDPQLIAKYQRRFPGFDDKIVSMYARGMSTREITRHLHD 128

Query: 125 LCGHAFSASSISAINKRLDESLKAFAERSLQEPFAYLILDARYEKVREAGVVMSQAVLIA 184
           L G   S   IS +   + + +  + +R L   +  +  DA   K+R+ G+V ++A+ IA
Sbjct: 129 LYGIDVSPDLISTVTDAVLDEVATWQQRPLDPVYPLVFFDAIRVKIRDEGMVRNKAIHIA 188

Query: 185 VGIDWDGRRQILSVEMAGRESRSAWKDFLVRLKGRGLKGVELVVSDDHAGLVAAIGEVIP 244
           +G+  DG +++L + +   E    W   +  L+ RG++ + L V D   G   AI  V P
Sbjct: 189 LGVRADGAKEVLGLWLEQNEGAKFWLRVMNELRNRGVEDILLAVVDGLKGFPDAITAVFP 248

Query: 245 EAVWQRCYVHFLRNALDHLPRKHGDDCLQELRWLYDRRDLDEAKADLAAW-LGKWSVRYP 303
           +A+ Q C VH LRN++D +  K   +    L+ +Y   D D A+  L A+  G W  RYP
Sbjct: 249 DAIVQTCIVHLLRNSMDFVSWKDRKNLASALKEIYRATDADAAEKALTAFEAGPWGQRYP 308

Query: 304 RLTSWVEETIEQTLTFFRLPRQHHKHLKSTNMLERLNEEIRRRTYVVRIFPNTESCLRLV 363
            +         + + FF  P +  + + +TN +E LN ++RR       FP+ E+  +L+
Sbjct: 309 AIGQSWRRAWGEVIPFFAFPDEVRRIIYTTNAIEALNSKLRRAVRARGHFPSDEAATKLL 368

Query: 364 RALAVETHENW 374
             +   + + W
Sbjct: 369 YLILNRSEKEW 379