Pairwise Alignments

Query, 398 a.a., ISRm5 transposase from Sinorhizobium meliloti 1021

Subject, 402 a.a., IS256 family transposase from Erwinia tracheiphila SCR3

 Score =  128 bits (322), Expect = 3e-34
 Identities = 93/361 (25%), Positives = 162/361 (44%), Gaps = 5/361 (1%)

Query: 18  LSNPDGLREVIRTVMQ----EVLEAEMDEALGAAKGERTPERLGYRSGHYGRTLITRVGK 73
           L  PD L +  R + +      L AEM    G  K +  P     R+G+  +T+ T    
Sbjct: 17  LKTPDDLSQFERLLKKISVGAALNAEMTRHPGDDKNQPRPAT-NARNGYSTKTVTTGDDP 75

Query: 74  LELRVPQDRSGHFSTELFERYQRSERALVATLAEMYVQGVSTRKVKAITEELCGHAFSAS 133
           LELR P+D  G F  +  ++ Q     +   +  +Y +G++T ++ A  +E      S +
Sbjct: 76  LELRTPRDHDGSFEPQRVKKNQTRSTGMDNPILSLYAKGMTTGEIAAAFKEPYDADVSPA 135

Query: 134 SISAINKRLDESLKAFAERSLQEPFAYLILDARYEKVREAGVVMSQAVLIAVGIDWDGRR 193
            +S +   + E +  +  R L      +  D    KVR+   V++++V +A GI+ +G++
Sbjct: 136 LVSKVADAVMEQVTEWQNRPLDAVCPIVYPDCIVLKVRQDSRVINKSVFLAPGINIEGQK 195

Query: 194 QILSVEMAGRESRSAWKDFLVRLKGRGLKGVELVVSDDHAGLVAAIGEVIPEAVWQRCYV 253
           ++  + +A  E    W + L  LK RGL  + +   D   G   AI  V P+A  Q C V
Sbjct: 196 ELPGMWLAENEGAEFWLNVLAGLKNRGLNDILIACVDGLKGFPDAINAVYPQACVQLCVV 255

Query: 254 HFLRNALDHLPRKHGDDCLQELRWLYDRRDLDEAKADLAAWLGKWSVRYPRLTSWVEETI 313
           H +RN+L  +  +      ++L+ +      + A   L  + G W  RYP+++   +   
Sbjct: 256 HMVRNSLRFVSWEGYKAVTRDLKAICQAPTEEAALQALDVFSGTWDSRYPQISRRWQANR 315

Query: 314 EQTLTFFRLPRQHHKHLKSTNMLERLNEEIRRRTYVVRIFPNTESCLRLVRALAVETHEN 373
              LTFF  P    K L +T+ +E LN  IR      ++FP  ++  + V        + 
Sbjct: 316 ASLLTFFAYPADIRKTLDTTSAIEPLNSVIRDAIKKRKVFPTDDAVKKEVWLAIQAASQK 375

Query: 374 W 374
           W
Sbjct: 376 W 376