Pairwise Alignments

Query, 398 a.a., ISRm5 transposase from Sinorhizobium meliloti 1021

Subject, 402 a.a., IS256 family transposase from Erwinia tracheiphila SCR3

 Score =  140 bits (354), Expect = 5e-38
 Identities = 96/361 (26%), Positives = 165/361 (45%), Gaps = 5/361 (1%)

Query: 18  LSNPDGLREVIRTVMQ----EVLEAEMDEALGAAKGERTPERLGYRSGHYGRTLITRVGK 73
           L  PD L +  R + +      L AEM    G  K +  P     R+G+  +T+ T    
Sbjct: 17  LKTPDDLSQFERLLKKISVGAALNAEMTRHPGDDKNQPRPAT-NARNGYSTKTVTTGDDP 75

Query: 74  LELRVPQDRSGHFSTELFERYQRSERALVATLAEMYVQGVSTRKVKAITEELCGHAFSAS 133
           LELR P+DR G F  +  ++ Q     +   +  +Y +G++TR++ A  +EL     S +
Sbjct: 76  LELRTPRDRDGSFEPQRVKKNQTRSTGMDNPILSLYAKGMTTREIAAAFKELYDADVSPA 135

Query: 134 SISAINKRLDESLKAFAERSLQEPFAYLILDARYEKVREAGVVMSQAVLIAVGIDWDGRR 193
            +S +   + E +  +  R L      +  D    KVR+   V++++V +A GI+ +GR+
Sbjct: 136 RVSKVADAVMEQITGWQNRPLDAVCPIVYPDCIVLKVRQDSRVINKSVFLAPGINTEGRK 195

Query: 194 QILSVEMAGRESRSAWKDFLVRLKGRGLKGVELVVSDDHAGLVAAIGEVIPEAVWQRCYV 253
           ++  + +A  E    W + L  LK RG + + +   D   G   AI  V P+   Q C +
Sbjct: 196 ELPGMWLAENEGAKFWLNVLTELKNRGNQDILIACVDGLKGFPDAINSVYPQTHIQLCII 255

Query: 254 HFLRNALDHLPRKHGDDCLQELRWLYDRRDLDEAKADLAAWLGKWSVRYPRLTSWVEETI 313
           H +RN L ++  K        L+ +Y       A+  LAA+  +W  +YP+++       
Sbjct: 256 HMVRNRLKYVAWKDYKAVTGGLKTVYQAPTEAAARMALAAFAEEWDDKYPQISKSWRAHG 315

Query: 314 EQTLTFFRLPRQHHKHLKSTNMLERLNEEIRRRTYVVRIFPNTESCLRLVRALAVETHEN 373
           E   TFF  P    K + +TN +E LN  IR      ++FP  +S  +++        + 
Sbjct: 316 ENLNTFFGYPSDIRKAIYTTNAIESLNSVIRAAIKKRKVFPTDDSVRKVIYLAIQSASKK 375

Query: 374 W 374
           W
Sbjct: 376 W 376