Pairwise Alignments

Query, 398 a.a., ISRm5 transposase from Sinorhizobium meliloti 1021

Subject, 402 a.a., IS256 family transposase ISEc39 from Escherichia fergusonii Becca

 Score =  154 bits (389), Expect = 4e-42
 Identities = 93/350 (26%), Positives = 168/350 (48%), Gaps = 1/350 (0%)

Query: 25  REVIRTVMQEVLEAEMDEALGAAKGERTPERLGYRSGHYGRTLITRVGKLELRVPQDRSG 84
           R + +  ++  L AE+ + LG  K          R+G+  +T++   G++EL  P+DR  
Sbjct: 28  RMLTKLTVETALNAELTDHLGHEKNA-PKSGSNTRNGYSSKTVLCDDGEIELNTPRDREN 86

Query: 85  HFSTELFERYQRSERALVATLAEMYVQGVSTRKVKAITEELCGHAFSASSISAINKRLDE 144
            F  +L +++Q     + + +  +Y +G++TR++ A  +E+     S + IS +   + E
Sbjct: 87  TFEPQLIKKHQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKE 146

Query: 145 SLKAFAERSLQEPFAYLILDARYEKVREAGVVMSQAVLIAVGIDWDGRRQILSVEMAGRE 204
            +  +  R L   +  + LD    KVR  G V+++AV +A+GI+ DG++++L + +A  E
Sbjct: 147 QVSEWQNRPLDALYPIVYLDCIVVKVRHGGSVINKAVFLALGINTDGQKELLGMWLAENE 206

Query: 205 SRSAWKDFLVRLKGRGLKGVELVVSDDHAGLVAAIGEVIPEAVWQRCYVHFLRNALDHLP 264
               W   L  LK RGL+ + +   D   G   AI  V P+   Q C +H +RN+L  + 
Sbjct: 207 GAKFWLGVLTELKNRGLQDILIACVDGLKGFPEAINSVYPQTHIQLCIIHMVRNSLKFVS 266

Query: 265 RKHGDDCLQELRWLYDRRDLDEAKADLAAWLGKWSVRYPRLTSWVEETIEQTLTFFRLPR 324
            K        L+ +Y     + A   L  + G W  +YP+++       E   TFF  P 
Sbjct: 267 WKDYKAVTNGLKAVYQAPTEEAALMALDKFAGVWDEKYPQISKSWRTHWENLNTFFGYPP 326

Query: 325 QHHKHLKSTNMLERLNEEIRRRTYVVRIFPNTESCLRLVRALAVETHENW 374
              K + +TN +E LN  IR+     ++FP  +S  +++        + W
Sbjct: 327 DIRKAIYTTNAIESLNSVIRQAIKKRKVFPTDDSVRKVIYLAIQSASKKW 376