Pairwise Alignments

Query, 474 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 468 a.a., Uncharacterized HTH-type transcriptional regulator YdcR from Escherichia coli ECRC62

 Score =  180 bits (456), Expect = 1e-49
 Identities = 140/451 (31%), Positives = 214/451 (47%), Gaps = 25/451 (5%)

Query: 28  VKHRIAARSLTPGARLPSIRSFALAMKVSKSTVVEAYERLQAEGVIRSRPGSGFFVA--- 84
           ++ +IA+    PG RLPS+R       +S  TV  AY+ L+++G I +RP SG++VA   
Sbjct: 11  LREQIASGIWQPGDRLPSLRDQVALSGMSFMTVSHAYQLLESQGYIIARPQSGYYVAPQA 70

Query: 85  -----APLAPLTLAEIGPRVDRAVDPLWISRQALEPGEGVLRPGCGWLPPHWMPEEGLRR 139
                AP+ P+T  E         D L  SR        V+     +  P   P + L R
Sbjct: 71  IKMPKAPVIPVTRDEAVDINTYIFDMLQASRDP-----SVVPFASAFPDPRLFPLQQLNR 125

Query: 140 ALRGIARGAAATLVDYGAPLGLLPLRQLLTRRVAQHGIEASPDQILLTESGTQAIDLLCR 199
           +L  +++ A A  V    P G   LRQ + RR A  GI  SPD+I++T    +A++L  +
Sbjct: 126 SLAQVSKTATAMSVIENLPPGNAELRQAIARRYALQGITISPDEIVITAGALEALNLSLQ 185

Query: 200 FLLKPGDAVLVDDPCYFN-FHALLRAHQARIFGVPYTPSGPDIGRFAEALAEH--KPRLY 256
            + +PGD V+V++PC++    AL R     +        G D+     AL E+  K    
Sbjct: 186 AVTEPGDWVIVENPCFYGALQALERLRLKALSVATDVKEGIDLQALELALQEYPVKACWL 245

Query: 257 ITNSALHNPTGAMLSPLVGHRLLKLAEQAGLTIIEDDIFADF---EETPAPRLAAFDGLE 313
           +TNS   NP G  L+P    +L+ L  Q  +T+IEDD++++     E P P   A+D  +
Sbjct: 246 MTNS--QNPLGFTLTPQKKAQLVALLNQYNVTLIEDDVYSELYFGREKPLP-AKAWDRHD 302

Query: 314 RVVHIGSFSKTLSAAVRCGFIVAPRDWVEALTDLKIATCFGAAGFSSELVLTLLKNGSYR 373
            V+H  SFSK L    R G++ A +     +  L++ +    +      ++  L    Y 
Sbjct: 303 GVLHCSSFSKCLVPGFRIGWVAAGKH-ARKIQRLQLMSTLSTSSPMQLALVDYLSTRRYD 361

Query: 374 KHMETVRQRLAGAMAETAQRLARI--GITPWIEPQAGMFLWCRLPDGIDAARLARQALAR 431
            H+  +R++LA       Q L R            +G FLW  LP+ +DA  L+  AL  
Sbjct: 362 AHLRRLRRQLAERKQRAWQALLRYLPAEVKIHHSDSGYFLWLELPEPLDAGELSLAALTH 421

Query: 432 GIVLAPGNVFSHAQTASGFLRFNVAQSEDER 462
            I +APG +FS  +  S F RFN A    ER
Sbjct: 422 HISIAPGKMFSTGENWSRFFRFNTAWQWGER 452