Pairwise Alignments

Query, 426 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 426 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  297 bits (761), Expect = 4e-85
 Identities = 160/423 (37%), Positives = 260/423 (61%), Gaps = 13/423 (3%)

Query: 1   MTISIFLGALLGPMALGVPIAFALILSGVALMLYLGL-FDAQIVAQNVLNGADSFPLMAV 59
           M   I LG+ +  + +G+P+A+AL LS +    ++ + F A ++   V  G + F LMA+
Sbjct: 1   MDALILLGSFIALILIGMPVAYALGLSALIGAWWIDIPFQALMI--QVAGGVNKFSLMAI 58

Query: 60  PFFLLAGEVMNTGGLSRRIVALAMAMVGHIRGGLGFVAIFAACILSSLSGSAVADAAALG 119
           PFF+LAG +M  GG+SRR+VA A  +VG +RGGL  V I A+    ++SGS+VAD A++G
Sbjct: 59  PFFVLAGAIMAEGGMSRRLVAFAGVLVGFVRGGLSLVNIMASTFFGAISGSSVADTASVG 118

Query: 120 ALLLPMMLKSGHDPARASGLIASASIIGPIIPPSIGFILFGVVGG--VSITKLFLAGIFP 177
           ++L+P M + G+    A+ +  S S+   + PPS   +L+ +  G  VSI  LF+AG+ P
Sbjct: 119 SVLIPEMERRGYPREFATAVTVSGSVQALLTPPSHNSVLYSLAAGGSVSIASLFMAGVVP 178

Query: 178 GLMIAAALSITWLIVARKEQFE----LPPRQSGRLRLRAFVDSLWALFLPVIIIAGLKFG 233
           GL+++A L +  LI A+K  +     +P +Q+    L+   D+LW L   VII+ G+  G
Sbjct: 179 GLLMSACLMVLCLIFAKKRNYPKGEVIPLKQA----LKICADALWGLMAMVIILGGILSG 234

Query: 234 VFTPTEAGVIAAVYSLFVSMVVYRELAPAQLFHVFVSAAKISAVVMFLVACAAVSAWLIT 293
           +FT TE+  IA +++ FV+M +YR+   ++L  +     +  ++VM L+A AA   +++T
Sbjct: 235 IFTATESAAIAVLWAFFVTMFIYRDYKWSELPKLMHRTVRTISIVMILIAFAASFGYIMT 294

Query: 294 VADVPGALAALLEPLMGNQTALLIAIMVLIVIVGTAMDMTPTILIMTPVLMPVIKQAGID 353
           +  +P  +  L   L  N+  +L+ I  +++++GT MDM P ILI+TP+L+PV+   G+D
Sbjct: 295 LMQIPAKITTLFLTLSDNRYVILMCINAMLLLLGTVMDMAPLILILTPILLPVVLGIGVD 354

Query: 354 PVYFGVLFIINNSIGLITPPVGTVLNVICGVSKLSMEDLMKGVMPFLFAELIVLFLLVLF 413
           PV+FG++ ++N  IGLITPPVG VL V   V K+S+E  +K ++PF     +VL  +   
Sbjct: 355 PVHFGMIMLVNLGIGLITPPVGAVLFVGAAVGKVSIEKTVKALLPFYGVLFLVLMAVTYI 414

Query: 414 PEL 416
           P L
Sbjct: 415 PAL 417