Pairwise Alignments

Query, 426 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 432 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

 Score =  249 bits (635), Expect = 2e-70
 Identities = 145/411 (35%), Positives = 243/411 (59%), Gaps = 10/411 (2%)

Query: 14  MALGVPIAFALILSGVALMLYLGLFDAQ-----IVAQNVLNGADSFPLMAVPFFLLAGEV 68
           M +GVPI  AL L+G A +  L   DAQ      V QN   G   +PL+A+P F+L G +
Sbjct: 14  MLVGVPIGAALGLAGAACIA-LANSDAQWFGLLAVPQNFYAGLGKYPLLAIPMFVLVGSI 72

Query: 69  MNTGGLSRRIVALAMAMVGHIRGGLGFVAIFAACILSSLSGSAVADAAALGALLLPMMLK 128
            +  G++ R+V  A+A+VG   G L  VAI  A  L  +SGS  A+AAA+GA+++  M +
Sbjct: 73  FDRSGVALRLVNFAIAIVGRGPGMLPLVAIAVAMFLGGISGSGPANAAAVGAVMIAAMSR 132

Query: 129 SGHDPARASGLIASASIIGPIIPPSIGFILFGV-VGGVSITKLFLAGIFPGLMIAAALSI 187
           +G+  A ++ ++ +A+    +IPPS+ FI++ V V G S+  LF AG+ PG++   AL I
Sbjct: 133 AGYPAAFSASVVGAAAATDILIPPSVAFIVYSVLVPGASVPALFAAGMVPGVLAGLALMI 192

Query: 188 TWLIVARKEQFELPPRQSGRLRL-RAFVDSLWALFLPVIIIAGLKFGVFTPTEAGVIAAV 246
             +++ARK +         R    ++F ++ W L  PV+I+ G++ G FTPTEA V+A  
Sbjct: 193 PAVLLARKHKMGALEATLPRPPFWKSFREATWGLAAPVLILGGMRAGWFTPTEAAVVAVF 252

Query: 247 YSLFVSMVVYRELAPAQLFHVFVSAAKISAVVMFLVACAAVSAW-LITVADVPGALAALL 305
           Y LFV M V+R +    LF +   + ++SAV++ +V+ A + A+ L T+  +     A++
Sbjct: 253 YGLFVGMFVHRTIKVRDLFVILRESGELSAVILLVVSLAGIFAYSLSTLGVIDPVTRAIV 312

Query: 306 EPLMGNQTALLIAIMVLIVIVGTAMDMTPTILIMTPVLMPVIKQAGIDPVYFGVLFIINN 365
              +G +  +L  +++L++ VG  +D     LI  P+L+P+++    DPV+FGV+  +  
Sbjct: 313 NSGLG-EYGILALLILLLITVGMFLDGVSIFLIFVPLLLPIVQYYKWDPVWFGVILTLKV 371

Query: 366 SIGLITPPVGTVLNVICGVSKLSMEDLMKGVMPFLFAELIVLFLLVLFPEL 416
           ++G  TPP+   L V C ++K+ ME+ ++ V   LF+  +V+ L+++FPEL
Sbjct: 372 ALGQFTPPLAVNLMVSCRIAKVRMEETVRWVGWMLFSMFVVMVLVIIFPEL 422