Pairwise Alignments

Query, 318 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 363 a.a., Ribose import permease protein RbsC from Azospirillum sp. SherDot2

 Score =  147 bits (370), Expect = 5e-40
 Identities = 108/322 (33%), Positives = 170/322 (52%), Gaps = 23/322 (7%)

Query: 3   RVVSFVRQPIV---VALVLIVLLLYLGEALSPGFATGGQILRLLIVASLLGIVAAGQNVV 59
           RV++  R+ ++    AL  +++L+ +  A S  F + G  + + +  + +  +      V
Sbjct: 35  RVMNDRRKDLIQKFAALAGLLVLVAVFSATSDAFLSVGNGMTIALQVTSIAYLGIAATCV 94

Query: 60  ILGGREGIDLSVGGVVSLSAILAGNVMNGADGGILP-AVAACLAAGAFFGLLNGLGVTLL 118
           I+ G  GIDLSVG V++LS + A   +    G  +P  +   +  GAF GLLNGL VT L
Sbjct: 95  IITG--GIDLSVGSVLALSGVAAALAVKA--GAPVPLGMGLGILVGAFCGLLNGLCVTRL 150

Query: 119 RIPPLVMTLGMLGVLQGLLVVIR-------MGIPSGQAAP-ALSRFVT-------QPLAY 163
           ++PP + TLGM+ V +G+ + I        +G   G+    A+ R V          +  
Sbjct: 151 KLPPFIATLGMMMVARGVALQITGARAVSGLGDSFGELGNGAMFRIVRIGEDGFPDVVFP 210

Query: 164 GIPGIIWLWIVIGILLALMLNRTVFGHRIYAIGSNEHAAYMAGVPVKLVRIALFMISGMF 223
           GIP  + L +VI I +A+ML+RT  G  IYA+GSN  AA ++GV V  V +  +++SG  
Sbjct: 211 GIPYPVVLMVVIAIAVAIMLSRTTLGRHIYAVGSNAEAARLSGVNVVGVTLFTYVLSGTL 270

Query: 224 AATAGLCLLGYSGTSFANVGEQYMLPSIIAVVFGGTSLAGGKGGYTGTMAGAVLLVILQS 283
           A   G  L+    T+  N G  Y L +I + V GGTSL GG G  +GT  GA ++ IL++
Sbjct: 271 AGLTGCVLMSRLVTAQPNEGVMYELDAIASAVIGGTSLIGGVGTISGTAIGAFVIGILRN 330

Query: 284 ILTTINIEESGRQMVFGATLLL 305
            L    +    +Q++ G  +LL
Sbjct: 331 GLNMNGVSAFTQQIIIGLVILL 352