Pairwise Alignments

Query, 355 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 863 a.a., Multifunctional non-homologous end joining protein LigD from Xanthobacter sp. DMC5

 Score = 75.9 bits (185), Expect = 4e-18
 Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 26/261 (9%)

Query: 15  PSSAAKKAGGFPLPVSTAPMEARSATELPGGDAWQYEPKWDGFRCLAFKSGDEVDIRAKS 74
           P +  + A   PLP    P  A  AT+ P G  + +E K+DG+R  A     +V +  ++
Sbjct: 244 PLTLPRGAKAAPLPAFIPPALATLATKAPAGTRYLHEIKFDGYRIQARVENGKVRLLTRT 303

Query: 75  GKP-LGRFFPEIVALLRRLEPDMFVLDGELVIEV-DGRLSFDALQMRLHPAASRVQKLSQ 132
           G     RF   I+A L R      + DGE+V+E  +G   F ALQ  L    S       
Sbjct: 304 GLDWTDRFGTGILAELNRFPIRTALFDGEIVVESGNGATDFSALQADLSEGRS------- 356

Query: 133 ETPAKLILFDMLAGTDGTILTGEPLQTRRACLEAFAKKNAVAEMLESSPF----TLDIKE 188
                  +FD+L   DG  LT  PL+ R+  LE    ++   ++  S+ F     L ++ 
Sbjct: 357 -DRFVYYVFDLL-HLDGHDLTPLPLKDRKDLLEKLVGQDG-DKVRYSAHFEDDGALVLRH 413

Query: 189 AERWLTSWEAGATDGVVAKRRDGVYECGE-RAMVKVKRLKTADCVVGGFRYESDS-SLVG 246
           A R        + +GVV+K +   Y  G  R  +K K L+  + VVGGF   + S + +G
Sbjct: 414 ACRL-------SLEGVVSKLKTAPYHSGRTRDWIKSKCLERQEFVVGGFVPSTTSRTAIG 466

Query: 247 SLLLGLYDTEGLLNHVGFTAT 267
           SL+LG+++ +G L +VG   T
Sbjct: 467 SLVLGVFE-DGKLRYVGRVGT 486