Pairwise Alignments

Query, 355 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 544 a.a., ATP-dependent DNA ligase from Pseudomonas simiae WCS417

 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 85/348 (24%), Positives = 150/348 (43%), Gaps = 36/348 (10%)

Query: 14  APSSAAKKAGGFPLPVSTA-----PMEARSATELPGGDA-WQYEPKWDGFRCLAFKSGDE 67
           +P   A++ GG P P   A     P+E     +L G  A WQ E KWDG R    K    
Sbjct: 198 SPDEHAQR-GGQPYPFFLAHGLSQPVE--QFHDLLGSPADWQVEWKWDGIRAQLVKREGR 254

Query: 68  VDIRAKSGKPLGRFFPEIVALLRRLEPDMFVLDGELVIEVDGRLSFDALQMRLHPAASRV 127
           + I ++  + +   FPE+ +L+  L PD  V+DGE+V+  D    F  LQ R+    +  
Sbjct: 255 LWIWSRGEELVTERFPELHSLVSGL-PDGTVIDGEIVVWKDTVQPFALLQQRI-GRKTLS 312

Query: 128 QKLSQETPAKLILFDMLAGTDGTILTGEPLQTRRACLEAFAKKNAVAEMLESSPFTLDIK 187
           +K+ ++ P  ++ +D+L    G          RR  LE    +     ++ S+  T    
Sbjct: 313 KKVLEDAPVAVLAYDLLE-HQGDDWRNHTQAERRTQLERVIAQCNQPVLVASALLTGATW 371

Query: 188 EA-ERWLTSWEAGATDGVVAKRRDGVYECGERAMVKVKRLKTADCVVGGFRYESDSSLVG 246
           EA  +   +  +   +G++ K RDG+Y  G          +T D  V  ++++ D   V 
Sbjct: 372 EALAKQREASRSLGVEGMMLKARDGLYGVG----------RTKDMGV-WWKWKVDPFSVD 420

Query: 247 SLLLGLYDTEG--LLNHVGFTATISDKERPALTNQLEALREPPGFTG----KAPGGPSRW 300
           ++L+      G     +  +T  + D    +    +   +   G T     K      + 
Sbjct: 421 AVLIYAQRGHGRRASLYSDYTFAVWDGPPGSERTLVPFAKAYSGLTDEEMRKVDAIVRKT 480

Query: 301 SSERSGEWEPVRPELVVEVRFDHVS-NRRFRHG-----TKLMRWRPDK 342
           + E+ G    V P +V E+ F+ ++ ++R + G      +++RWR DK
Sbjct: 481 TVEKFGPVSSVTPSMVFELGFEGIALSKRHKSGIAVRFPRMLRWRQDK 528