Pairwise Alignments

Query, 355 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 556 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 52.0 bits (123), Expect = 4e-11
 Identities = 81/327 (24%), Positives = 132/327 (40%), Gaps = 46/327 (14%)

Query: 27  LPVSTAPMEARSATELPGGDAWQYEPKWDGFRCLAFKSGDEVDIRAKSGKPLGRFFPEIV 86
           LP    P    +    P  D W +E K+DG+R     +  +V ++ + G      +PEI 
Sbjct: 243 LPDFIEPQLCETLARPPASDDWLHEIKFDGYRIQMRIADGKVTLKTRKGLDWTAKYPEIA 302

Query: 87  ALLRRLEPDMFVLDGEL-VIEVDGRLSFDALQMRLHPAASRVQKLSQETPAKLILFDMLA 145
                L PD  ++DGE+  ++ +G   F ALQ            LS+     L+ F    
Sbjct: 303 DAASEL-PDC-IIDGEICALDDNGAPDFAALQ----------AALSEGKTGNLVYFAFDL 350

Query: 146 GTDGTILTGEPLQTRRACLEAFAKKNAVAEMLESSPFTLDIKEAERWLTSWEAG------ 199
             DG    GE L++ R       +K  + + L +      I+  + + +  +A       
Sbjct: 351 LFDG----GEDLRSMR----LVERKKRLEDFLAAGSDDPRIRYVDHFESGGDAVLRSACK 402

Query: 200 -ATDGVVAKRRDGVYECGER-AMVKVKRLKTADCVVGGFRYESDSSLVGSLLLGLYDTEG 257
            + +G+V+K+ D  Y+ G      K K     + V+GG  Y + +    SLL+G++  + 
Sbjct: 403 LSLEGIVSKQMDAPYQSGRTDTWAKSKCRAGHEVVIGG--YATTNGKFRSLLVGVHRGDH 460

Query: 258 LLN----HVGFTATISDKERPALTNQLEALREPPGFTGKAPGGPSRWSSERSGEWEP--- 310
            +       GF A   ++  P L   LEA + P  FTG   G P +   E+   W P   
Sbjct: 461 FVYVGRVGTGFGAAKVERFFPKL-KALEASKSP--FTG--IGAPKK---EKEVTWLPDGR 512

Query: 311 VRPELVVEVRFDHVSNRRFRHGTKLMR 337
             P   V    D V  RR     + +R
Sbjct: 513 ALPACRVRSSTDVVRFRRSGRSPRALR 539