Pairwise Alignments

Query, 358 a.a., ABC transporter for Lactose, ATPase component (from data) from Sinorhizobium meliloti 1021

Subject, 371 a.a., ABC transporter nucleotide binding/ATPase (sugar) from Agrobacterium fabrum C58

 Score =  359 bits (921), Expect = e-104
 Identities = 198/331 (59%), Positives = 234/331 (70%), Gaps = 10/331 (3%)

Query: 1   MSELQLSDVRKSYGGLEVIKGVDLDIKSGEFVVFVGPSGCGKSTLLRMIAGLEEISSGDL 60
           MS ++L  V KS+G ++VI  +DL I +GEFVVFVGPSGCGKSTLLR+IAGLEE S G++
Sbjct: 1   MSGVELKGVSKSFGAVDVIHDIDLSITAGEFVVFVGPSGCGKSTLLRLIAGLEETSRGEI 60

Query: 61  TIDDVRMNDVDPSKRGIAMVFQSYALYPHMTVRENMGFALRFAGVPRAEIEKRVNEAAHI 120
            I    + D DPS RGIAMVFQSYALYPHMTV +NMGF LR A  P+ E+   V  AA I
Sbjct: 61  LIGGRDVTDADPSDRGIAMVFQSYALYPHMTVAQNMGFGLRMAHRPKEEVTAMVRHAAEI 120

Query: 121 LELGALLDRKPKQLSGGQRQRVAIGRAIVRHPKIFLFDEPLSNLDAELRVHMRIEIARLH 180
           L L  LLDR+P QLSGGQRQRVAIGRAIVR+P++FLFDEPLSNLDAELRV MRIEIARLH
Sbjct: 121 LHLTPLLDRRPGQLSGGQRQRVAIGRAIVRNPEVFLFDEPLSNLDAELRVGMRIEIARLH 180

Query: 181 KQLATTIVYVTHDQVEAMTLADKIVVMRAGVVEQVGSPLDLYDDPANLFVAGFIGSPKMN 240
           KQL  T++YVTHDQ EAMTLADKIVV+RAG +EQ+GSP +LY DP NLFVAGFIGSPKMN
Sbjct: 181 KQLGNTMIYVTHDQTEAMTLADKIVVLRAGRIEQIGSPFELYSDPDNLFVAGFIGSPKMN 240

Query: 241 FLKGVIEIDE-DQAYARLPDYGDAKIPVTLQAAAGTAVTIGIRPEH--FDEAGPAALDLA 297
           F+    E      A  RL     A +P   Q      + +GIRPE+      G   L + 
Sbjct: 241 FVPAGHEAGALVVAGHRLTFAAPAGLPTNCQ------LQLGIRPENLTLTRDGERGLAVT 294

Query: 298 IDMLEHLGGETFAYARHHGNGELIVVETKNG 328
           +   E LGG T+ Y  H   G  ++V+ + G
Sbjct: 295 VGFTEFLGGTTYLYG-HIEPGMPLIVQGEAG 324