Pairwise Alignments

Query, 358 a.a., ABC transporter for Lactose, ATPase component (from data) from Sinorhizobium meliloti 1021

Subject, 358 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  331 bits (849), Expect = 2e-95
 Identities = 181/359 (50%), Positives = 241/359 (67%), Gaps = 8/359 (2%)

Query: 1   MSELQLSDVRKSYGGLEVIKGVDLDIKSGEFVVFVGPSGCGKSTLLRMIAGLEEISSGDL 60
           M+ + L  + KSYG L ++KG+DL+I  GEFVVFVGPSGCGKST LRM+AGLE I+ G++
Sbjct: 1   MASVSLRKLDKSYGALRIVKGIDLEINDGEFVVFVGPSGCGKSTTLRMVAGLESITGGEV 60

Query: 61  TIDDVRMNDVDPSKRGIAMVFQSYALYPHMTVRENMGFALRFAGVPRAEIEKRVNEAAHI 120
            I D  +N + P +R IAMVFQ YALYPH TVRENMGF+L+  GV  ++    ++EAA +
Sbjct: 61  KIGDRVVNQLPPRERDIAMVFQDYALYPHKTVRENMGFSLKVRGVSASQANASIDEAAKM 120

Query: 121 LELGALLDRKPKQLSGGQRQRVAIGRAIVRHPKIFLFDEPLSNLDAELRVHMRIEIARLH 180
           L +  LLDR+P QLSGGQRQRVA+GRAIVR P++FLFDEPLSNLDA+LR  +R EI RLH
Sbjct: 121 LGIEHLLDRRPGQLSGGQRQRVAMGRAIVRRPQVFLFDEPLSNLDAKLRGQVRTEIKRLH 180

Query: 181 KQLATTIVYVTHDQVEAMTLADKIVVMRAGVVEQVGSPLDLYDDPANLFVAGFIGSPKMN 240
           +QL TTI+YVTHDQVEAMTLAD+IV++R G +EQVG+P ++Y+ P ++FV GF+G+P MN
Sbjct: 181 QQLGTTIIYVTHDQVEAMTLADRIVILRGGDIEQVGTPDEVYNRPESVFVGGFVGAPAMN 240

Query: 241 FLKGVIEIDEDQAYARLPDYGDAKI-PVTLQAAAGTAVTIGIRPEHFD--EAGPAALDLA 297
           F +  +  D   A++       A I P       G  V +GIRPEHF   E   + L ++
Sbjct: 241 FARARVNGDR-LAFSDGNSLPMAAIRPSRETGLEGRDVIVGIRPEHFGPAEGFDSQLAVS 299

Query: 298 IDMLEHLGGETFAYARHHGNGELIVVETKNGRGLKT-GDRLTARFDPVSVLVFDGEGKR 355
           + ++E LG +T     H   G+  +      +   T  + L    DP  V +FD   +R
Sbjct: 300 VQVVEPLGSDTLV---HFSLGDAALTARMPPQLRPTPNEELRIGVDPSKVHLFDATTER 355