Pairwise Alignments

Query, 282 a.a., formate dehydrogenase accessory protein FdhD, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 271 a.a., NAD-dependent formate dehydrogenase, C subunit protein from Agrobacterium fabrum C58

 Score = 83.2 bits (204), Expect = 6e-21
 Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 23/265 (8%)

Query: 21  IAVTAVDE-TGAVLDKQIACERPLTLYLNWRPIVTLMTLGARPEALALGYMKNQGFIKDL 79
           +A TA+ E T A  ++ +  E P+           +M   A     A+G+   +G I   
Sbjct: 13  VARTALREGTPATGERAVPEEVPVAFSYGGSTHAVMMASPADLIDFAVGFSLTEGIISMR 72

Query: 80  AQLESVIVDWAVSSAAI---ITREQTDDLDKKLSEKTVTTGCGQGTVYGDLMAGLDDIK- 135
           ++++++ V  A     +   +T  + D L  +        GCG        + G++ I+ 
Sbjct: 73  SEIQAIEVVEAGQGYDVQVDLTDAEADALRARRRHMAGPVGCG--------LCGIESIEQ 124

Query: 136 ----LPVPSLKQSTLYG-----LLRNINDYNETYKNAGAVHGCGLCEG-EQIRSFVEDVG 185
               +P  S  +S+++G      ++ +ND     +   AVHG G     E + +  EDVG
Sbjct: 125 AVRVVPDLSSVKSSVHGNDIVAAVKALNDAQTLNRETRAVHGAGFYNPREGLLAVREDVG 184

Query: 186 RHNAVDTLAGEMWLKDEVGSDKIFYTTGRLTSEMVIKVAKMGIPVLLSRSGVTQMGLELA 245
           RHNA+D LAG +          I   T RL+ EMV K A +G PVL + S  T + +E A
Sbjct: 185 RHNALDKLAGAVVNAGISAQMGIVAVTSRLSVEMVQKTAILGCPVLAAISAPTALAIETA 244

Query: 246 QQLGITLIARAKGRHFLVYHGAETI 270
            + GITL+A  +G  F ++  A+ I
Sbjct: 245 DRAGITLVALVRGEDFEIFTRADRI 269