Pairwise Alignments

Query, 912 a.a., pseudouridine synthase, Rsu (RefSeq) from Shewanella amazonensis SB2B

Subject, 451 a.a., putative zinc protease from Pseudomonas sp. RS175

 Score =  162 bits (411), Expect = 3e-44
 Identities = 114/421 (27%), Positives = 204/421 (48%), Gaps = 17/421 (4%)

Query: 43  EYRLDNGLKVLLFPDPTKETVTVNVTYKVGSKHENYGETGMAHLLEHLVFKGTPKHKDIP 102
           E+ LDNGLKV++  D     V   V YKVGS +E  G+TG++H LEH++FKG+ K     
Sbjct: 32  EFMLDNGLKVVVREDHRAPVVVSQVWYKVGSSYETPGQTGLSHALEHMMFKGSEKVGPGE 91

Query: 103 AE--LSSHGARPNGTTWTDRTNYFETFAATEENIDWALSMESDRMVNSFIAKKDLDSEMT 160
           A   L   GA  N  T  D T Y++  A   + +  A  +E+DRM +  +  ++   E+ 
Sbjct: 92  ASLILRDLGAEENAFTSDDFTAYYQVLA--RDRLGVAFELEADRMASLRLPPEEFSREIE 149

Query: 161 VVRNEFE-RGENSPFRITLQRMMASAFEWHNYGKSTIGARSDLENVSIERLQDFYRKYYQ 219
           V++ E   R ++ P     +R  A A+    Y   TIG  +DL+ + +E L+ +Y+ +Y 
Sbjct: 150 VIKEERRMRTDDKPMSKAYERFKAMAYPASGYHTPTIGWMADLDRMKVEELRHWYQSWYA 209

Query: 220 PDNATLIVAGKFAPEDMLKKIEATFGNIPKPNRTIEPLYTVEPAQDGERQVTVRRVGDVQ 279
           P+NATL+V G   P+++    +  FG I + +  +  +  +E  + GERQ+T+     + 
Sbjct: 210 PNNATLVVVGDVTPDEVKSLAQRYFGPIARRDVPVAKI-PLELGEPGERQITLHVQTQLP 268

Query: 280 LLGTIYHVPPGA----HEDYAAIDVLNEVLSATPNGRLHKSLVEAKLASSVFGMNFQWQD 335
            +   ++VP  A         A+ +++ +L    +GR+   L   +   S    ++    
Sbjct: 269 SVMMAFNVPSIATATDKRSVNALRLISALLDGGYSGRIPTQLERGEELVSGGSSSYDAYT 328

Query: 336 PGVAIF----MAEMDKTADMDATQKALLDTLESIRNTPITDKEVETAKRTLLKNLTLAFN 391
            G  +F         K   +   +  L   LE ++ T  T  E+E  +  ++  L    +
Sbjct: 329 RGDTLFTLSATPNTQKNKTLAQAEAGLWRLLEQLKTTAPTADELERVRAQVIAGLVYERD 388

Query: 392 S--SERVALELSEWLGMGDWRLLFLNRDRLEKVSAAEVQRVAEYYLTQNNRTLGRFIPAE 449
           S  S+  A+   E +G+  W+L+      L+ V+  ++Q+ A+ Y T++  ++   +P E
Sbjct: 389 SITSQATAIGQLETVGL-SWKLMDTELAELQSVTPQDIQKAAQLYFTRSRLSVAHVLPEE 447

Query: 450 K 450
           K
Sbjct: 448 K 448



 Score = 64.3 bits (155), Expect = 2e-14
 Identities = 95/429 (22%), Positives = 175/429 (40%), Gaps = 52/429 (12%)

Query: 492 TETLTLNSGTKVSLLQKKTRGESVVVRISGQFGDLRSLSGKNAVGDAVGEMLLRGSSKYS 551
           T    L++G KV ++++  R   VV ++  + G      G+  +  A+  M+ +GS K  
Sbjct: 30  THEFMLDNGLKV-VVREDHRAPVVVSQVWYKVGSSYETPGQTGLSHALEHMMFKGSEKVG 88

Query: 552 REQIKEELDKLQASLRIGGSNGNLFASVETT-------RANLLPVLDIVTDVLRNPSFPE 604
             +    L  L       G+  N F S + T       R  L    ++  D + +   P 
Sbjct: 89  PGEASLILRDL-------GAEENAFTSDDFTAYYQVLARDRLGVAFELEADRMASLRLPP 141

Query: 605 KEF----ELYKTETKVAIEQNLQDPQSLAFNAYSRHQSPYGKDDPRYVGTFEEQLAELDK 660
           +EF    E+ K E ++  +     P S A+  +     P        +G     +A+LD+
Sbjct: 142 EEFSREIEVIKEERRMRTDDK---PMSKAYERFKAMAYPASGYHTPTIGW----MADLDR 194

Query: 661 LTLKQVKRYHGDFYNAKQMQVSIIGDFDKDATVSALDTLTKGWKSKQTYQRIASPYVKLD 720
           + +++++ ++  +Y      + ++GD   D   S          +++ +  IA   V + 
Sbjct: 195 MKVEELRHWYQSWYAPNNATLVVVGDVTPDEVKSL---------AQRYFGPIARRDVPVA 245

Query: 721 ASPITFNTPDKENATFVASLSLPVGDMDADAP------------ALTLGNYILGGGFLSS 768
             P+    P +   T      LP   M  + P            AL L + +L GG+ S 
Sbjct: 246 KIPLELGEPGERQITLHVQTQLPSVMMAFNVPSIATATDKRSVNALRLISALLDGGY-SG 304

Query: 769 RLATRL-RQKDGLSYGAGSFLRLSSEDQRGSLGAYAICAP-QNLAKVELGFREEIARLLK 826
           R+ T+L R ++ +S G+ S+   +  D   +L A       + LA+ E G    + +L  
Sbjct: 305 RIPTQLERGEELVSGGSSSYDAYTRGDTLFTLSATPNTQKNKTLAQAEAGLWRLLEQLKT 364

Query: 827 DGFTADEVEAAKSGLLQGRKVSRSQDKELVGTLVGNLKLDRSMAFDADFE-AKLAALTAD 885
              TADE+E  ++ ++ G    R        T +G L+         D E A+L ++T  
Sbjct: 365 TAPTADELERVRAQVIAGLVYERDSITS-QATAIGQLETVGLSWKLMDTELAELQSVTPQ 423

Query: 886 DLNKAFRKY 894
           D+ KA + Y
Sbjct: 424 DIQKAAQLY 432