Pairwise Alignments

Query, 678 a.a., oligopeptidase A (RefSeq) from Shewanella amazonensis SB2B

Subject, 686 a.a., peptidyl-dipeptidase from Agrobacterium fabrum C58

 Score =  380 bits (975), Expect = e-109
 Identities = 238/676 (35%), Positives = 352/676 (52%), Gaps = 16/676 (2%)

Query: 9   NALPPFSAIKPEHIQPAVEQAIDHCRAEIARVLERGDF-SWQGLVAPLEEADDRLSKLWS 67
           N LP F A+K E   PA + A+     EI  +    +  S++  V  LE A D LS++ S
Sbjct: 18  NGLPKFDAVKDEDFAPAFDAALFSHEQEIDAIAGNPEAPSFENTVTALEIAGDELSRISS 77

Query: 68  PVSHMNSVLSTEAWRAAHDACLPLLSEYGTFVGQHQGLYQAYKTLKNSDEFQGLSKAQQQ 127
              +     +    +A      P +S + + +G ++ L++   TL    E  GL+  +++
Sbjct: 78  LFWNKAGANTNGVIQALEREIAPKMSRHYSKIGMNEALFKRIDTLWEKREALGLTGEEKR 137

Query: 128 VIDHALRDFELSGIGLDDDKKARYGEIVKRLSELSSSFSNQVLDATHAWQKLITDESELK 187
           V++   + F  SG  L  +++ R   I + L+ L + F   VL    +W+ L++ + EL 
Sbjct: 138 VLERHWKGFVHSGAKLPKERQERLAAINEELAGLGAKFGQNVLADEKSWKLLLSTDEELA 197

Query: 188 GLPESALAAARAMAEEKGEQG-YLFTLDFPSYLPVMMYSENRELRQECYTAFVTRASDQG 246
           G+P     A    A E GE G +  TL      P + +SE R+LR++ + A+V R    G
Sbjct: 198 GIPGFLRDAMAGAAGEHGEDGKFAVTLSRSIIEPFLTFSERRDLREQAFKAWVAR----G 253

Query: 247 PNAGEFDNGPLMEELLALRHELATLLGFDSFAHKSLATKMAETPGQVISFLNELALHSRP 306
            N GE DN  ++   L LR E A LLG+ +FA   L   MA+TP  V   L ++   +  
Sbjct: 254 ENGGETDNREIVRRTLELREEKAKLLGYANFAAYKLDDTMAKTPDAVNGLLRQVWEKAVQ 313

Query: 307 QAKQELDELKAFAAKEYGQTDLKAWDLSFYAEKLKQHRYEISQEELRPYFPENKVLSGLF 366
           +A +E   L A  A+E    ++  WD   YAEKL+  ++  S+ EL+PY    K++   F
Sbjct: 314 RAGEEEAGLAAIIAEEGKNHEVLPWDWRHYAEKLRAQKFNFSEAELKPYLQLEKIIEACF 373

Query: 367 HTVERLFGMKIVEQQEFDRWHKDVRFFHIMDSEGEHRGSFYLDLYARSGKRGGAWMDECR 426
              ERLFG+  VE +    +H DVR F I D++G+ +  F  D +AR  KR GAWM   +
Sbjct: 374 DVAERLFGIHAVEVKGVVGYHPDVRIFEIRDNKGDLKAMFLGDYFARPSKRSGAWMSSFQ 433

Query: 427 VRRQTP--DGL--QKPVAYLTCNFNGPVGNKPALFTHDEVVTLFHEFGHGIHHMLTKVEV 482
            + + P  DG   + P+ Y  CNF  P   KPAL + D+  TLFHEFGH +H ML+ V  
Sbjct: 434 SQHKLPLKDGTVGEIPIIYNVCNFAKPAEGKPALLSLDDARTLFHEFGHALHGMLSDVTY 493

Query: 483 GGVSGINGVPWDAVELPSQFLENWCWEEAALGEISGHYETGEPLPKAMLDKMLAAKNFQS 542
             VSG  GV  D VELPSQ  E+W      L + + HYETG P+PKA+LDK+LAA+ F +
Sbjct: 494 PSVSG-TGVSRDFVELPSQLYEHWLTVPEILEKYALHYETGAPMPKALLDKVLAAQTFNA 552

Query: 543 AMMMVRQLEFSLFDFRLHLEYNGEDGARIQ-ETLDEVRQQVAVVIPPSFNRFQHSFSHIF 601
               V     ++ D   H   +  D   +Q E L  +    ++V+  +   FQH FS   
Sbjct: 553 GFNTVEFTSSAIVDMAFHTRDSVADPMAVQGEVLSGLNMPKSIVMRHATPHFQHVFS--- 609

Query: 602 AGGYAAGYYSYKWAEVLSADAFSRFEAEG-IFNPDTGRDFLTHILEMGGSEEPMELFRRF 660
             GY+AGYYSY W+EVL ADAF+ FE  G  F+ +  R    +I  +GGS +P E +  F
Sbjct: 610 GDGYSAGYYSYMWSEVLDADAFAAFEETGNAFDGEMARRLKDNIYSVGGSIDPEEAYLAF 669

Query: 661 MGREPNTDALLRHSGI 676
            G+ P+ DA+L   G+
Sbjct: 670 RGKMPSPDAMLLKRGL 685