Pairwise Alignments

Query, 1048 a.a., CzcA family heavy metal efflux protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 1045 a.a., efflux RND transporter permease subunit from Pectobacterium carotovorum WPP14

 Score = 1286 bits (3328), Expect = 0.0
 Identities = 630/1039 (60%), Positives = 823/1039 (79%), Gaps = 3/1039 (0%)

Query: 1    MLDYIIKSSIRQRFMVLVVALMVTLWGITELKRTPLDALPDLSDVQVIIKTSFPGQAPQL 60
            M+ YII+ S++ R +VL+ AL++  WG+  L++TPLDALPDLSDVQVII+ S+PG+APQ+
Sbjct: 1    MIAYIIRWSLKNRLLVLLAALLMAAWGLLSLQKTPLDALPDLSDVQVIIRVSYPGKAPQV 60

Query: 61   VEEQVTYPLSTAMLAVPGAKTVRGFSMFGDSYVYVIFEDGTDIYWARSRVLEYLSQVRTR 120
            VE QVTYPL+T ML+VPGAKTVRGFSMFGD+YVYV+FEDGTD YWARSRVLEYLSQV++ 
Sbjct: 61   VENQVTYPLTTTMLSVPGAKTVRGFSMFGDAYVYVLFEDGTDPYWARSRVLEYLSQVQSS 120

Query: 121  LPAGVEPSLGPDASGVGWVYEYALVDRSGNLDLSQLKSLQDWYLKLELQSVEGVSEVATV 180
            LPA  + SLGPDA+GVGW+YEYALVDRSG   L+ L+  QDW LK EL++V  V+EVA+V
Sbjct: 121  LPADAKTSLGPDATGVGWIYEYALVDRSGKYSLADLRGFQDWLLKYELKTVPDVAEVASV 180

Query: 181  GGMEQTYQIVLEPDKLAIYKLDIATIKAAITRANSEAGGSVVEMAEAEYMVRAKGYRQTL 240
            GGM + YQIV++P+++    +    I +A+  AN E GGSV+E+ EAEYMVR  GY +T 
Sbjct: 181  GGMVKQYQIVVDPERMRTQGITHQQIVSAVQAANQENGGSVLELGEAEYMVRTTGYLKTA 240

Query: 241  DDFREIPLGITTGAGTPLLLKDVATIRKGPASRRGIAELDGEGEVVGGIIVMRYGENALA 300
             DF ++   ITT  G P+LL+DVAT+R+GP  RRGIAEL+GEGEV GGIIV+RYG+NAL 
Sbjct: 241  QDFNQVV--ITTRNGIPVLLQDVATLREGPEMRRGIAELNGEGEVAGGIIVLRYGKNALN 298

Query: 301  TIDAVKAKLDELKAGLPDGVEIVPTYDRSQLIQNSVDNLLTKVVEEMLVVGLVCLLFLLH 360
            T+ AVKA+L E++  LP GVEIVPTYDRSQLI++++D L  K++EE +VV ++C LFL H
Sbjct: 299  TLHAVKARLQEIQKSLPAGVEIVPTYDRSQLIEHAIDTLSFKLLEEFVVVAIICALFLFH 358

Query: 361  ARSTLVAVFTLPLSILIAFIVMNHMGINANIMSLGGIAIAIGAVVDGAIVMIENLHKHLE 420
             RS LVA+ +LPL IL AFI+M + G+NANIMSLGGIAIAIGA+VD AIVMIEN+HK +E
Sbjct: 359  FRSALVAIISLPLGILGAFIIMRYQGVNANIMSLGGIAIAIGAMVDAAIVMIENMHKVIE 418

Query: 421  HFKRQHE-REPSTREHWEVVTQASLEVGPALFFSLLIITLSFIPVFALEAQEGRLFAPLA 479
             ++ ++  ++P   E W++  +A++EVGPALF SLLIITLSF+PVF+LEAQEGR+F+PLA
Sbjct: 419  QWRHENPGKQPQNNEWWQLAERAAVEVGPALFCSLLIITLSFVPVFSLEAQEGRMFSPLA 478

Query: 480  YTKTFAMAAASVLAITLVPVLMGYFIRGKIPSEEANPISRFLIALYKPALNKVLAFPKLT 539
            +TKT+AMA A+ L ITLVPVLMGYF+RGKIP E+ANPI+R+LIA Y P L KVL++PK T
Sbjct: 479  FTKTYAMAVAAGLGITLVPVLMGYFVRGKIPDEQANPINRWLIAAYHPVLQKVLSYPKTT 538

Query: 540  LLVALLALASVVYPASRMGSEFMPELEEGDLLYMPTALPGISAGKAAEILQQTDRLIKTV 599
            LL++ L L   ++P SR+GSEFMP L+EGDLLYMP+ LPGISA +A  +LQQTDRLIKTV
Sbjct: 539  LLISGLLLLLTLFPLSRLGSEFMPPLDEGDLLYMPSTLPGISAREAGRLLQQTDRLIKTV 598

Query: 600  PEVARVFGKIGRAETATDPAPLTMLETTIMLKPRQEWREGINLNDIVDELQRTVKVPGLT 659
            PEV  VFGK GRAETATDPAPLTMLE+TI LKPR +WREG+ ++ +V EL RTV +PG+ 
Sbjct: 599  PEVESVFGKAGRAETATDPAPLTMLESTIRLKPRDQWREGMTMDKLVAELDRTVNLPGIA 658

Query: 660  NAWVQPIKTRIDMLSTGIKTPVGIKITGANVDELQQIGANVEAILAALPNTRSAYAERAG 719
            N WV PI+ R+DML+TGIK+PVGIK+ G N++++++  A +E ++  +P   SA AER  
Sbjct: 659  NVWVPPIRNRLDMLATGIKSPVGIKVNGNNLEDIERTAAQIEQVVKRVPGVTSALAERLA 718

Query: 720  GGRYIDIAPKLDVASRYGMTLNDIQDVVRYAIGGMNVGESVQGAERYPINLRYPRELRDS 779
            GGRYIDI      A+RYG+++ ++Q VV   IGG N+GE+++G +RYPIN+RYPRELRDS
Sbjct: 719  GGRYIDIDIDRQRAARYGVSVEELQSVVATLIGGQNIGETIEGRQRYPINIRYPRELRDS 778

Query: 780  LEKLRALPVITKSGHYLPLGNLADIQISDGPPMLKSENGRLISWVFVDIQGTSIGEYIQT 839
            L+KLR LP++T +G  + L  LADI++++GPPMLKSEN RL  W++VD++G  +   ++ 
Sbjct: 779  LQKLRDLPIVTANGSRVTLAELADIRVNEGPPMLKSENSRLSDWIYVDLRGRDLKSAVED 838

Query: 840  AKSALEAELNLPPRYSYSFAGQYEYMQRVDAKLKQVVPLAIGIIFILLMLTFGSGKQASM 899
             + A+  ++ LP   S S++GQ+EY++R   K+K VVP  + IIF+LL +TF   K A +
Sbjct: 839  MQQAVAQQVTLPEGVSLSWSGQFEYLERATEKMKVVVPFTLLIIFVLLYVTFNRIKDALL 898

Query: 900  IMLSLPFALVGSTWLLYLLDYNLSVAVAVGMIALAGVAAEFGVVMLVYLNNAIKDRDALG 959
            IM +LPFAL+G  WLLYLL YNLSVA AVG IALAGV+AEFGV+ML+YLN+A++     G
Sbjct: 899  IMATLPFALIGGVWLLYLLGYNLSVAGAVGFIALAGVSAEFGVIMLLYLNHAVEKHRVAG 958

Query: 960  HYHNESDLKAALVEGAVMRIRPKAMTVATIFFGLLPIMWGAGSGNEVMQKIAAPMVGGMV 1019
               +   L  A+ EGAV+R+RPK MTVATI  GLLPIMW  GSG+E+MQ+IAAPM+GGMV
Sbjct: 959  QALSRQQLMDAIHEGAVLRVRPKMMTVATIMAGLLPIMWEGGSGSEIMQRIAAPMIGGMV 1018

Query: 1020 TAPLLSLFVLPALYLLVYR 1038
            +APLLS+ V+PA+YLL+++
Sbjct: 1019 SAPLLSMLVIPAVYLLLHK 1037