Pairwise Alignments

Query, 1048 a.a., CzcA family heavy metal efflux protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 1042 a.a., heavy metal efflux pump (cobalt-zinc-cadmium) from Kangiella aquimarina DSM 16071

 Score = 1248 bits (3228), Expect = 0.0
 Identities = 630/1040 (60%), Positives = 799/1040 (76%), Gaps = 13/1040 (1%)

Query: 1    MLDYIIKSSIRQRFMVLVVALMVTLWGITELKRTPLDALPDLSDVQVIIKTSFPGQAPQL 60
            M++ II+ S++ RF VL+  L++   G   LK TP+DA+PDLSDVQVIIKT++PGQAPQ+
Sbjct: 1    MIEGIIRWSVKNRFFVLLATLILAGIGGWSLKNTPVDAIPDLSDVQVIIKTNYPGQAPQV 60

Query: 61   VEEQVTYPLSTAMLAVPGAKTVRGFSMFGDSYVYVIFEDGTDIYWARSRVLEYLSQVRTR 120
            VE+QVTYPL+TAML+VPGA TVRG+S FGDSYVYVIF++ TD YWARSRVLEYLSQV   
Sbjct: 61   VEDQVTYPLTTAMLSVPGAVTVRGYSFFGDSYVYVIFDEDTDAYWARSRVLEYLSQVAPT 120

Query: 121  LPAGVEPSLGPDASGVGWVYEYALVDRSGNLDLSQLKSLQDWYLKLELQSVEGVSEVATV 180
            LP+  +P LGPDA+GVGWVY YALVDR+G  D+SQL+SLQDW+LK ELQ+V GVSEV+ +
Sbjct: 121  LPSNAQPQLGPDATGVGWVYLYALVDRTGKHDISQLRSLQDWFLKYELQTVPGVSEVSAL 180

Query: 181  GGMEQTYQIVLEPDKLAIYKLDIATIKAAITRANSEAGGSVVEMAEAEYMVRAKGYRQTL 240
            GGM + YQ+ + PDKL  + + ++ I+ AI R N E G SVVEMAEAEYMVRA GY Q  
Sbjct: 181  GGMVKQYQVKVHPDKLRAFNIPLSHIQMAIQRGNQEVGASVVEMAEAEYMVRASGYIQGK 240

Query: 241  DDFREIPLGITTGAGTPLLLKDVATIRKGPASRRGIAELDGEGEVVGGIIVMRYGENALA 300
            +D   IPLG+    GTPLLLKDVA I  GP  RRGIAEL+GEGEVVGGI+VMR+GENA  
Sbjct: 241  EDLANIPLGLNVN-GTPLLLKDVADITVGPQMRRGIAELNGEGEVVGGIVVMRFGENAQK 299

Query: 301  TIDAVKAKLDELKAGLPDGVEIVPTYDRSQLIQNSVDNLLTKVVEEMLVVGLVCLLFLLH 360
            TID VKAKLD LK GLP+GVE+V  YDRS LI+ +V+NL  K++EE +VV LVC+ FL H
Sbjct: 300  TIDGVKAKLDTLKNGLPEGVELVTVYDRSGLIERAVENLWYKLLEEFIVVALVCIAFLFH 359

Query: 361  ARSTLVAVFTLPLSILIAFIVMNHMGINANIMSLGGIAIAIGAVVDGAIVMIENLHKHLE 420
             RS+LVA+ +LP+ IL AFIVM+  G+NANIMSLGGIAIAIGA++DGAIVMIEN+HKH+E
Sbjct: 360  VRSSLVAIVSLPVGILAAFIVMHAQGLNANIMSLGGIAIAIGAMIDGAIVMIENMHKHME 419

Query: 421  HFKRQHEREPSTREH-WEVVTQASLEVGPALFFSLLIITLSFIPVFALEAQEGRLFAPLA 479
                   R P T+E+ W+VV +++ EVGPALFFSLLIIT+SF+PVF LEAQEGR+F+PLA
Sbjct: 420  -------RTPLTKENRWQVVAESAAEVGPALFFSLLIITVSFVPVFTLEAQEGRMFSPLA 472

Query: 480  YTKTFAMAAASVLAITLVPVLMGYFIRGKIPSEEANPISRFLIALYKPALNKVLAFPKLT 539
            +TKT+AMAA++ LA+TLVPVLMGYFIRGK+  E  NP++R LIA+Y PAL  VL +P+ T
Sbjct: 473  FTKTYAMAASAALAVTLVPVLMGYFIRGKVLPEHKNPLNRALIAVYMPALRTVLHYPRST 532

Query: 540  LLVALLALASVVYPASRMGSEFMPELEEGDLLYMPTALPGISAGKAAEILQQTDRLIKTV 599
            L +A +     ++P +++GSEF+P L+EGDL+YMPT  PG+S GKA EILQQTD+LI TV
Sbjct: 533  LALAFIITVVGLWPVNKIGSEFIPPLDEGDLMYMPTTYPGLSIGKAREILQQTDKLIATV 592

Query: 600  PEVARVFGKIGRAETATDPAPLTMLETTIMLKPRQEWREGINLNDIVDELQRTVKVPGLT 659
            PEV  VFGKIGRAETATDPAPLTM+ET I LKPR+EWREG+    +  EL   VK+PGLT
Sbjct: 593  PEVKSVFGKIGRAETATDPAPLTMIETFIQLKPRKEWREGMTTVKLKKELDALVKIPGLT 652

Query: 660  NAWVQPIKTRIDMLSTGIKTPVGIKITGANVDELQQIGANVEAILAALPNTRSAYAERAG 719
            NAWV PIKTRIDML+TGIKTPVGIK+ G ++ E+++IG  +E +L  +  T S Y+ER  
Sbjct: 653  NAWVMPIKTRIDMLATGIKTPVGIKVAGPDLKEIEKIGRRLEQVLKDVLGTASVYSERVA 712

Query: 720  GGRYIDIAPKLDVASRYGMTLNDIQDVVRYAIGGMNVGESVQGAERYPINLRYPRELRDS 779
            GGRYI +  + D A+RYG+ + D+Q +V  AIGGMNV ++++G ERYP+NLRYP++LR S
Sbjct: 713  GGRYIKVDIQRDKAARYGLNIADVQQIVATAIGGMNVTQTIEGLERYPVNLRYPQDLRSS 772

Query: 780  LEKLRALPVITKSGHYLPLGNLADIQISDGPPMLKSENGRLISWVFVDIQGTSIGEYIQT 839
             E+L  LP++T+SG  + L ++A++ I DGPP +KSEN RL  W FVDI G  IG Y++ 
Sbjct: 773  PEQLALLPIVTESGQQIALADVANVYIEDGPPAIKSENARLNGWTFVDIDGVDIGSYVKN 832

Query: 840  AKSALEAELNLPPRYSYSFAGQYEYMQRVDAKLKQVVPLAIGIIFILLMLTFGSGKQASM 899
            A   +E +++LP  YS +++GQYEYM R  AKL  VVPL + II ILL   F S  + ++
Sbjct: 833  AMEVVEEQVDLPAGYSLNWSGQYEYMLRAKAKLTYVVPLTLAIIIILLYFNFRSFAEVAI 892

Query: 900  IMLSLPFALVGSTWLLYLLDYNLSVAVAVGMIALAGVAAEFGVVMLVYLNNA----IKDR 955
            IM +LP A+VGS WL+YLL YN SVAV VG IALAGVA E  V+MLVYLN A    + + 
Sbjct: 893  IMGTLPLAMVGSIWLMYLLGYNFSVAVGVGFIALAGVAVEISVIMLVYLNQAYRHMVDEC 952

Query: 956  DALGHYHNESDLKAALVEGAVMRIRPKAMTVATIFFGLLPIMWGAGSGNEVMQKIAAPMV 1015
               G       L+ A+++G+ +R+RP  MT A I  GLLPIM+G G+G+EVM +IAAPMV
Sbjct: 953  KRQGVEPRLETLRQAVLQGSGLRVRPVMMTAAAIIVGLLPIMYGTGTGSEVMSRIAAPMV 1012

Query: 1016 GGMVTAPLLSLFVLPALYLL 1035
            GGM++A +L+L VLP +YLL
Sbjct: 1013 GGMLSAVILTLLVLPVVYLL 1032