Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase RecG (RefSeq) from Shewanella amazonensis SB2B

Subject, 698 a.a., ATP-dependent DNA helicase RecG (EC 3.6.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  574 bits (1480), Expect = e-168
 Identities = 347/691 (50%), Positives = 430/691 (62%), Gaps = 32/691 (4%)

Query: 23  LSKLGVNTVQDLLFHLPLRYEDRTRIYAIDELIPGTTATIEAEVISSQIVNGRKRMLTCN 82
           L KLG+    DL  HLPLRYED TRI ++     G  A IE  V  S+I    +R L   
Sbjct: 18  LHKLGLVRDIDLALHLPLRYEDETRIVSLRGARDGQLAQIEGTVTHSEISFRPRRQLLVT 77

Query: 83  VRDASGGLTLRFFNFSMAQKNGLQPGMTIRAFGEIRTGKHQLEIIHPEYKLTAAGESPSL 142
           + D +   TLRFF F  A +  L  G  +R  GE+R G     ++HP + L A GE P  
Sbjct: 78  LDDGTDTCTLRFFTFYPAHQKTLAVGARVRVRGELRGGFAGWSMVHPAFHL-AGGELP-- 134

Query: 143 ADTLTPIYPTTEGLKQASWIRLTAQALEQLEEGGLPELLPESLQPN-------RLSLADA 195
            D LTP+YPT+  L QA +IR  A     L+   L E LP +L            +L DA
Sbjct: 135 -DALTPVYPTSAQLPQA-YIRKAAAG--GLKRADLSETLPPALLGGLQAVVRGTWTLRDA 190

Query: 196 VRTLHRPPADAELWQLEQGQHPAQQRLVQEELLAHNLSMLKLR-ERSNQDAAEPLAATGQ 254
           ++ LH P  D  L  LE   HPA QRL  EELLA  LS    + ER+   A    AA G 
Sbjct: 191 LQYLHHPGPDVSLDALEDRSHPAWQRLKAEELLAQQLSQFTAKQERAALRAPVLRAAPGG 250

Query: 255 LIPRFLESLPFAPTNAQSRVVAEIHADMTKATPMMRLVQGDVGSGKTLVAALSALAAIEN 314
           L  + L +LPFA T AQ RV  EI  D+ +  PM RL+QGDVGSGKT+VAAL+A  AI+ 
Sbjct: 251 LHEQLLGALPFALTGAQRRVGEEIARDLLRQVPMHRLLQGDVGSGKTVVAALAAAIAIDA 310

Query: 315 GCQVALMAPTELLAEQHAANFARWFEPL----GLKVGWLAGKLKGKARTQTLEDIASGAA 370
           G Q ALMAPTE+LAEQH A    W EPL    G +V WL G  K K R + L  IASG A
Sbjct: 311 GWQCALMAPTEILAEQHFAKLIGWLEPLLAPLGKRVAWLTGSQKKKQRGEMLVLIASGEA 370

Query: 371 QMIVGTHAIFQEQVSFSRLALTIIDEQHRFGVHQRLGLREK------GIQQGFFPHQLIM 424
            ++VGTHA+ Q+QV F  LAL IIDEQHRFGV QRL LR K      G +Q   PH L+M
Sbjct: 371 ALVVGTHAVIQDQVVFKHLALAIIDEQHRFGVAQRLALRSKVGVAADGTEQE--PHLLMM 428

Query: 425 TATPIPRTLAMTAYADLDTSIIDELPPGRTPITTVAIPDTRRLDVIERVRQAALQDKRQA 484
           TATPIPRTLAM+ YADLD S IDELPPGRTPI T  + D+RR +VIER+R   L   RQ 
Sbjct: 429 TATPIPRTLAMSYYADLDVSTIDELPPGRTPIVTKVVADSRRAEVIERIR-GQLAQGRQV 487

Query: 485 YWVCTLIEESEVLECQAAEDTAGGLKEALPELGIGLVHGRMKGAEKQAIMADFKAGKLDL 544
           YWVC LIEESE ++   A  T   L  +LP + +GL+H RM  AEK+A+M+ F  G++ +
Sbjct: 488 YWVCPLIEESEAIDLSNATATHAELSASLPGVLVGLLHSRMPVAEKKAVMSLFTGGQMGV 547

Query: 545 LVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKAP----L 600
           LV+TTVIEVGVDVPNASLM+IE+ ER GL+QLHQLRGRVGRGA AS CVL+Y  P    L
Sbjct: 548 LVSTTVIEVGVDVPNASLMVIEHAERFGLSQLHQLRGRVGRGAAASACVLMYTPPDGGRL 607

Query: 601 SFTAQARLGVLRESNDGFVIAQKDLELRGPGEVLGTRQTGLAQMKVADLVRDQALIPHIQ 660
             TA+ RL  + +++DGF IA++DLE+RGPGE LG RQ+G   ++ ADL  D  L+   +
Sbjct: 608 GETARERLRAMADTSDGFEIARRDLEIRGPGEFLGARQSGAPLLRFADLATDGHLLDWAR 667

Query: 661 KLARHLMTQAPDNVDAIIERWLGGREQYVQA 691
           + A  ++ Q P   +  I RWLGG+ +Y++A
Sbjct: 668 EAAPVMLAQYPAAAEKHIARWLGGKAEYLKA 698



 Score = 29.6 bits (65), Expect = 5e-04
 Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 11/109 (10%)

Query: 14  GVAARVAEKLSKLGVNTVQDLLFHLPLRYEDRTRIYAIDELIPGTTATI--------EAE 65
           GVAA   E+   L + T   +   L + Y     +  IDEL PG T  +         AE
Sbjct: 413 GVAADGTEQEPHLLMMTATPIPRTLAMSYYADLDVSTIDELPPGRTPIVTKVVADSRRAE 472

Query: 66  VIS---SQIVNGRKRMLTCNVRDASGGLTLRFFNFSMAQKNGLQPGMTI 111
           VI     Q+  GR+    C + + S  + L     + A+ +   PG+ +
Sbjct: 473 VIERIRGQLAQGRQVYWVCPLIEESEAIDLSNATATHAELSASLPGVLV 521