Pairwise Alignments

Query, 359 a.a., type IV pilus biogenesis protein PilM (RefSeq) from Shewanella amazonensis SB2B

Subject, 217 a.a., pilus assembly protein from Pseudomonas simiae WCS417

 Score =  114 bits (286), Expect = 2e-30
 Identities = 63/184 (34%), Positives = 103/184 (55%)

Query: 1   MLSNLWKRQAPQMVGIDIGSHEVKAILLSKTADGYKIVSHAAVPVKKGAVNDHDIRDAAA 60
           M    +  +A  ++G+DI    ++ I L ++  G+ I  +    +    V D  + D   
Sbjct: 1   MAKGFFTGKARTLLGVDINDTAIRLIELGRSPSGFNIQGYVTQALPAQTVVDGTLLDLEG 60

Query: 61  VVDCLRQLRRTLPKSCKFAAVAVSGSAVMTKVIYMDASLSEAEMEAQIEIEADNLIPYSL 120
           V   LR     L  S + AA AV+G +V+T++I ++A L++ EM   I++EAD  IPY L
Sbjct: 61  VGRALRSAWSRLSTSVRGAAAAVAGPSVITRMIDLEAGLTDDEMAWMIQMEADQYIPYPL 120

Query: 121 DEVSIDFETLSVNSIDPSKVDVLLSACRTENIDARVDALDEVDLETKVVDIEGYALGRSA 180
           D+V+IDF+     ++DP++V+VLL+AC  E ++AR   L    L  KV+D+E +AL R+ 
Sbjct: 121 DDVAIDFQVRGPTALDPNRVEVLLAACLKEQVEAREAVLALAGLVPKVIDVEAFALARAC 180

Query: 181 ELIF 184
              F
Sbjct: 181 SQDF 184