Pairwise Alignments

Query, 86 a.a., transcriptional antiterminator, Rof (RefSeq) from Shewanella amazonensis SB2B

Subject, 92 a.a., Rho-specific inhibitor of transcription termination (YaeO) from Pseudomonas sp. S08-1

 Score = 70.5 bits (171), Expect = 4e-18
 Identities = 35/83 (42%), Positives = 51/83 (61%)

Query: 1  MQDYQRIACDRYDVLELACIRRYPLLLELKDEGRIHGRAVTTETRADKSEWLLIETATSH 60
          M  YQ + CD +D LE+AC+  Y L +EL +      RA+ T T   K E+L+++T    
Sbjct: 1  MNTYQPLNCDLHDFLEIACMHGYRLQVELVEGPSFVARALDTRTAPSKEEFLVLQTEEGK 60

Query: 61 RAIRLDRIIAITPDIEGAEFGRV 83
          + +RLD+++AITP   GA FGRV
Sbjct: 61 QEVRLDQLLAITPLDPGASFGRV 83