Pairwise Alignments

Query, 86 a.a., transcriptional antiterminator, Rof (RefSeq) from Shewanella amazonensis SB2B

Subject, 86 a.a., Rho-binding antiterminator from Escherichia coli ECRC98

 Score = 52.0 bits (123), Expect = 1e-12
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 4  YQRIACDRYDVLELACIRRYPLLLELKDEGRIHGRAVTTETRADKSEWLLIETATSHRAI 63
          YQ I CD YD LELAC     L LELKD  ++  +A    +R +  E+L++E A   R +
Sbjct: 7  YQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASDLVSRKN-VEYLVVEAAGETREL 65

Query: 64 RLDRIIAIT-PDI 75
          RLD+I + + P+I
Sbjct: 66 RLDKITSFSHPEI 78