Pairwise Alignments

Query, 639 a.a., putative diguanylate phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

Subject, 648 a.a., Membrane bound c-di-GMP receptor LapD from Pseudomonas sp. S08-1

 Score =  179 bits (455), Expect = 3e-49
 Identities = 158/635 (24%), Positives = 298/635 (46%), Gaps = 27/635 (4%)

Query: 1   MTLFRQLYSLLFGLFLLVITALAYVQFTET-KSFLTKQMESDLNNVSNSLGLLLVPALET 59
           M+L +QL+ L   LFL+V    +++   ET +  L  Q+ S   + + +LGL + P ++ 
Sbjct: 1   MSLLKQLF-LAICLFLVVAFTGSFIAGVETSREQLLSQLRSHAQDAATALGLSMTPHVD- 58

Query: 60  GDIATAETLINVIFEGGYYQQVKLTWLVDGKQQ--EWNNSLEIQGVPQWFINLGIFGTIK 117
            D A  E +++ IF+ GY+  +++   + G++   E   +     VP WF++L       
Sbjct: 59  -DPAMIELMVSSIFDSGYFATIRVV-RIPGEEVIVERRTTTTSDKVPAWFVDLVDLDPQG 116

Query: 118 RESTITSGWLQLAQLEVTAHPGFGYHELWRILTNTIIVFSILFLVAIFLARFGLSWILKP 177
            ++ I  GW Q A++EV +HP F   +LW     +++   +  +++  L  + L   L+P
Sbjct: 117 GDALIMRGWEQAARVEVLSHPQFALAKLWDSAIGSLLWLLLCGVISAILGGWLLRTQLRP 176

Query: 178 LHIVSEHAKSIANRQFGPELAIPKTSELKEVVIAFNSMSSQLKQIFSSLDEEVTALRKKN 237
           L  +   A++I  R+F     +P+T ELK VV+A N M  +LKQ+F+        LR++ 
Sbjct: 177 LDNMVSQAQAITRREFLTLPRVPRTPELKRVVLAMNQMVEKLKQLFAEEAARSEKLREEA 236

Query: 238 LVDQVSGLPNRQYLVGRINSWLS---EPGSGALFMAKFDWLEEVHAKYGYQVRDETIKLL 294
             D ++GL NR+    ++ + L+   +  SG L   + + L  ++ + G Q  D  I  +
Sbjct: 237 YQDSLTGLANRRLFEIKLANQLAVTEQNASGYLMFLRVNDLGGLNQRMGGQRTDSLIYSI 296

Query: 295 SEKLQSQLEEI-APG-VVARIAAFEFAFLVFDVDKELISKYLQTLIRTVN--QEISKAGG 350
            E L+  LE+  AP  + +R    EF  L   +  E   +  Q L   +   ++   +  
Sbjct: 297 GELLKRLLEQRGAPDWLASRSRGGEFTLLAPGLVAEDADRLAQELADGLESLRQTGASDC 356

Query: 351 KPNEHFAIGIAERIGSMTVSDILAQSDNAL-QTAIKSGKVYHW---FESSEEQMFTREQW 406
            P  H  +GIA       V++++ ++D AL Q    +GK +     F+++  Q      W
Sbjct: 357 TPVAH--MGIAAFRPGEEVANVIGRADQALAQAQSNAGKSWERLDDFQTTNGQGL--HDW 412

Query: 407 REKLSSAINAKLFQFRWQPIQLTDGAGLLQHE--LYCQLEIGDKLAHAGQFMPYVELLSL 464
           R  +  A++  + Q  +QP+        + H+  L   L+   +   AG+F+P++E L  
Sbjct: 413 RRWIDDALSQSMLQLYFQPVAACADTSQILHQKVLARLLDPQGEAVAAGRFLPWIERLGW 472

Query: 465 GALLDKCLIQKVHDIHLLERNFEPVAINLTHQSLTDTDFHQWLQQFLRSTPLADRLCFDI 524
            A  D  +++  H +  L +  +P+A++L+  +L D    + L   L+  P    L    
Sbjct: 473 AARFDLAMLE--HSLAHLAKYPQPLALSLSAATLRDAGSLEKLLNLLKEHPQQGELMTLE 530

Query: 525 PESGVYSNPEACEALCAIIRDNGAKFGIDHFGRQFGSMSYLQTLRPSYVKLDQSF-AYYD 583
            +      P   E L   +R+ G   G+ HFG +F  +  L  L  +Y+K+D S+    D
Sbjct: 531 LDERYLPPPAELEKLSQQVREAGYHLGLQHFGGRFSLIGNLTHLGLAYLKIDGSYIRAID 590

Query: 584 ENQHNAELCRALVNVARGLEIQVIVTGIQEKPQLD 618
           +         A+      +++ +I   ++ + +L+
Sbjct: 591 KEDDKRVFIEAIFRATNSIDLPLIAEMVETEGELN 625