Pairwise Alignments

Query, 723 a.a., toxin secretion ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 705 a.a., Type I secretion system ATPase, LssB family LapB from Variovorax sp. SCN45

 Score =  374 bits (961), Expect = e-108
 Identities = 227/693 (32%), Positives = 368/693 (53%), Gaps = 3/693 (0%)

Query: 26  LDSLVLLTEYFGSPCSSESLAAGLPLSGAILTPDLVPQAAARAGLNARLTRKGLDQISPI 85
           LD+++ +  ++G   S ES+   L          L+   A + GL  RL       + P 
Sbjct: 11  LDAMLFVARHYGIGASEESVRVSLAWERGAPLDTLLDHMARQLGLTVRLGEFSDAMLDPW 70

Query: 86  MMPCILLLKDKKACLLRELTS--EKAVIQLPETGGEETLPVEQLETLYVGYLFLVKQQYR 143
            +P ++   + +  ++R      +  V+   + G E  LP+ +L         L      
Sbjct: 71  RLPLVVEFDNGEVGVVRASDGHGQLGVLLGGDHGLETALPLAELRLHAKRVAVLRPNTAV 130

Query: 144 GDMRFDVHHHDNKSHWLLKTLKDAAPIYRDALIASVLVNLFALVSPLFIMNVYDKVVPNL 203
            D R D +    K++W           Y D ++AS+  N+ AL S +F M +YD+VVP  
Sbjct: 131 PDARVDDYIKPYKANWFWAIALRDWRRYGDIVLASMFANVLALASMIFSMQIYDRVVPAQ 190

Query: 204 AFESLWVLAIGAGIAYIFDLVMRQLRSYLIDVAGKKVDIIVSSQLFAKAVGIPLSKRSPS 263
           +  +LWVL  G  +A +F+ ++R  R+++ DV GK+ D+ VS  +F  A+ +    RS S
Sbjct: 191 SEPTLWVLFGGVMLAVVFEFMLRVSRTHISDVIGKRADLKVSDVVFGHALRLRTDARSKS 250

Query: 264 VGGMAKQLGEFDSIRDILTSATITTLVDLPFAVFFLIIIFIVAGDLAVLPLLGGAIIIGY 323
            G    Q+ E + +R++LTS TI+ + DLPF + FL+++++VAG LA++ L    +++  
Sbjct: 251 TGSFIAQVREVEQVRELLTSTTISAVADLPFFLLFLVVLWLVAGPLALVALAAVPLLVIP 310

Query: 324 TLYIQPKLKAAIDESNKFASLKHGHLIESLAALESIKAYGAEGLVQKSWQQMIGHTANWQ 383
            L IQ  L     E  + ++L++  L+E++  +E IK   AE   Q  W  +   +A   
Sbjct: 311 GLLIQKPLARLASEGMRESALRNALLVEAVEGIEDIKLMRAEPRFQNQWNHVNDVSAGVS 370

Query: 384 LKAKKLSNSVSNVASFMVQLTVVGVVILGVYRVADNAISMGGIIAAVMLSSRAMSPMAQL 443
           ++ + L++ +      +  +    V++ G + V    ++ G ++ + +L+SR +SP+AQL
Sbjct: 371 MRQRFLTSLLMTWTQEVQTIVYAVVLLAGCFLVMRGDMTTGALVGSSILASRMISPLAQL 430

Query: 444 ASLLTRANHTASALRQLDQIMTQEDEFENKGHLVSKTRLMGKIEADHVSFCYPGSEK-PV 502
           + +  R      A   LDQ+M +  +  +   LV    L G      V F Y   +K P 
Sbjct: 431 SGVFARWQQAKVARAGLDQLMQRPVDQADGARLVHAPALHGNYALAGVEFRYGKEDKSPA 490

Query: 503 LHPTSLSIQPGEKVAIIGRNGSGKSTLAKLLCGLYKPTKGSLRYDGIDSAQIHPSDLRRN 562
           L    L IQ G+KVA++GR GSGKSTL +LL GL  P +G +  D +D + I P+DLRR+
Sbjct: 491 LTIAQLQIQAGDKVALLGRMGSGKSTLLQLLAGLQSPQQGHVALDALDLSLIDPADLRRD 550

Query: 563 FGYLPQDVVLFHGSIRDNILFGTRQVSEHQLIRAVQISGVSLFTNLESEGLDQQVGEGGQ 622
            G L Q+  LFHGSIR+N+  G    ++ Q+  AV ++G   F    +EGLD+ + EGG 
Sbjct: 551 MGLLTQNARLFHGSIRENVTMGMPLATDDQVFEAVAMAGALSFLQSRAEGLDELIHEGGL 610

Query: 623 ALSRGQRQTVALARATLNDPPILLMDEPTASLDARAEKQFIRAMEHVSKDRTLVIITHKM 682
            LS GQRQ + LAR  +  P I+L+DEPTA  D   E+  I +M      RTLV+ TH+M
Sbjct: 611 GLSGGQRQALLLARTLIRQPSIVLLDEPTAHFDEVTERHVIDSMGAWLGPRTLVVATHRM 670

Query: 683 HLLKLVDRVIVLDRGHVLADGPKNDVLEKLSLG 715
            +L+ VDR++V+D G ++ DG K+ VL +LS G
Sbjct: 671 PVLQWVDRIVVIDGGRIVMDGSKDQVLGRLSHG 703