Pairwise Alignments

Query, 723 a.a., toxin secretion ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 717 a.a., Type I secretion system ATPase, LssB family LapB from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  397 bits (1020), Expect = e-114
 Identities = 215/562 (38%), Positives = 353/562 (62%), Gaps = 12/562 (2%)

Query: 157 SHWLLKTLKDAAPIYRDALIASVLVNLFALVSPLFIMNVYDKVVPNLAFESLWVLAIGAG 216
           + W    L+    I+ +A++A+ +++   L S L+ M VYD+VVP   + +LWVL  GA 
Sbjct: 119 TEWFSHALRKHRRIFVEAMLATFIISAVGLTSSLYSMQVYDRVVPTKGYATLWVLTAGAL 178

Query: 217 IAYIFDLVMRQLRSYLIDVAGKKVDIIVSSQLFAKAVGIPLSKRSPSVGGMAKQLGEFDS 276
           +A + + +M+Q+RS+++D A K +D+ +S   F KA+ I +  R  +VG  A Q+  F+S
Sbjct: 179 MAIVLEFMMKQVRSHMVDRASKAIDMELSGVFFGKAMDIRMDARPATVGTFASQIRHFES 238

Query: 277 IRDILTSATITTLVDLPFAVFFLIIIFIVAGDLAVLPL--LGGAIIIGYTLYIQP--KLK 332
           +R  +T++T+  L D PFAVFF+ +I ++AG +A++P+  +   +++G+ L+++P  +L 
Sbjct: 239 VRQFMTTSTLFILADAPFAVFFVGVIALIAGPVAIVPMAMIPIGMLVGF-LFLKPIERLS 297

Query: 333 AA-IDESNKFASLKHGHLIESLAALESIKAYGAEGLVQKSWQQMIGHTANWQLKAKKLSN 391
            A + ESN+    K+G LIE++  +ESIKA   E  + + +Q M    A+ +L+ + L++
Sbjct: 298 GANMRESNR----KNGLLIEAIDGIESIKASAGEWKMLERYQAMSTSMADNELQLRALTS 353

Query: 392 SVSNVASFMVQLTVVGVVILGVYRVADNAISMGGIIAAVMLSSRAMSPMAQLASLLTRAN 451
             +N+A  + QL+ VG++  G Y +    ++MGG+IA  ++S RA++PMAQ+  L+ +  
Sbjct: 354 RGTNMAQVIQQLSYVGLIASGAYAITAGDLTMGGLIACSIISGRALAPMAQIPQLIIQWK 413

Query: 452 HTASALRQLDQIMTQEDEFENKGHLVSKTRLMGKIEADHVSFCYPGSEKPVLHPTSLSIQ 511
           +   AL+ LD IM    + E    LV      G +  D V+F Y   ++PVL   +L I+
Sbjct: 414 NAQIALKALDAIMAMPSDREASQRLVVPETCEGLLRLDKVAFHY-NPQQPVLTVPALEIR 472

Query: 512 PGEKVAIIGRNGSGKSTLAKLLCGLYKPTKGSLRYDGIDSAQIHPSDLRRNFGYLPQDVV 571
           PGE++A+IG  GSGK+TL KLL GLY P +G +  DG+D   + P  +R + GYLPQDV 
Sbjct: 473 PGERIAVIGSVGSGKTTLIKLLSGLYHPREGQIFLDGVDVQHLAPEYVREHIGYLPQDVR 532

Query: 572 LFHGSIRDNILFGTRQVSEHQLIRAVQISGVSLFTNLESEGLDQQVGEGGQALSRGQRQT 631
           LF+G++R+N+  G    S+  ++ A Q++G+ L      +GL+ ++ EGG+ LS GQRQ 
Sbjct: 533 LFNGTLRENLTLGLPTPSDATILAACQLTGLDLVVQTHPKGLELEISEGGRGLSGGQRQL 592

Query: 632 VALARATLNDPPILLMDEPTASLDARAEKQFIRAM-EHVSKDRTLVIITHKMHLLKLVDR 690
           V L R  +  P +LL+DEPTAS+DA+ E   +R + E +S D  LV++THK  +L  V+R
Sbjct: 593 VGLTRMLIARPKLLLLDEPTASMDAQLEATVMRHLFEEISPDSALVVVTHKPAVLPRVNR 652

Query: 691 VIVLDRGHVLADGPKNDVLEKL 712
           +IV+DRG +L DGP+  V++KL
Sbjct: 653 LIVVDRGRILLDGPREAVIDKL 674