Pairwise Alignments

Query, 423 a.a., sensor histidine kinase (RefSeq) from Shewanella amazonensis SB2B

Subject, 420 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  147 bits (370), Expect = 8e-40
 Identities = 109/347 (31%), Positives = 174/347 (50%), Gaps = 20/347 (5%)

Query: 77  LSLLIDTLLWISWLYFSGGATNAFISLLLLPIAIAAVTLPFWAPWTLAAITTLAYSLMLY 136
           L L  D  +    LYFSGG+TN F+S  L+P+ IAAVTLP+     L+ I    Y+L+L 
Sbjct: 80  LQLACDLFIHSVLLYFSGGSTNPFVSYYLVPLTIAAVTLPWRYSVVLSGIALTLYTLLLA 139

Query: 137 AVPAMEGGHHEHAGHMAGGSMASHYVGMWFNFLLSALVLTTSVALIARRLRQTDAELAAL 196
               ++         +A  ++  +  GMW +F LSA V+T   A +A  LR+ +   A  
Sbjct: 140 RFYPLQ------TFPIARENLQIY--GMWLSFALSAAVITFFAARMAEELRRQEELRAIR 191

Query: 197 RESQLRQEQLIALGTASAQMSHQLATPLASLRLLLDEVAEGDTEPGLVAEMDL---ALTR 253
           RE  LR +QL+A+ T +A  +H+L TPLA++ +LL+E+ +   +P L  ++ +    + +
Sbjct: 192 REEGLRDQQLLAVATQAAGAAHELGTPLATMSVLLNEMTQDHHDPALQEDLGVLREQVKQ 251

Query: 254 CETSLNSLREATEAIRERKLTVVSAGQLLHLLKQQVLLLMPDVVMDISLSDEVAGARLST 313
           C+ +L  L  A EA R   + +    Q L     +  L+ P+      L  + +  R++ 
Sbjct: 252 CKQTLQQLVRAAEANRRLAVEMQDVTQWLDEALNRWHLMRPEASYRFHLLGQGSVPRMAP 311

Query: 314 DVSLLPSLLALVDNGAKASKKHGGEARVWLSARLVNEACIRLDIRDAGPGIDAQKLTALG 373
              L  +LL L++N A A     G    W      +   + + IRD G G+       +G
Sbjct: 312 PPDLTQALLNLLNNAADACPDGLGVQLDW------DAEDVTISIRDHGAGVPLAIAEQIG 365

Query: 374 ARPVLSE--QGLGMALMLSHASLERLGGELHLGNLPEGGCLASVRLP 418
            +P  +   +G G+ L LS AS+ R GG + L +  EGG L  +RLP
Sbjct: 366 -KPFFTTKGKGFGLGLFLSKASVTRAGGSVKLYSHEEGGTLTELRLP 411