Pairwise Alignments

Query, 423 a.a., sensor histidine kinase (RefSeq) from Shewanella amazonensis SB2B

Subject, 420 a.a., Sensor histidine kinase RegB from Pseudomonas sp. RS175

 Score =  138 bits (347), Expect = 4e-37
 Identities = 110/362 (30%), Positives = 179/362 (49%), Gaps = 20/362 (5%)

Query: 62  LKLRHALVLSAPGLFLSLLIDTLLWISWLYFSGGATNAFISLLLLPIAIAAVTLPFWAPW 121
           ++LR +  ++     + L  D  +  + LYFSGG+TN F+S  L+P+ IAAVTLP+    
Sbjct: 65  IRLRTSWPVTELEYAVQLAFDLFIHSALLYFSGGSTNPFVSYYLVPLTIAAVTLPWRYSL 124

Query: 122 TLAAITTLAYSLMLYAVPAMEGGHHEHAGHMAGGSMASHYVGMWFNFLLSALVLTTSVAL 181
            L+ I    Y+L+L     +E         +A  ++  +  GMW +F L+A V+T   A 
Sbjct: 125 ILSGIALALYTLLLARFYPLE------TFPIARENLQIY--GMWLSFALAAAVITFFAAR 176

Query: 182 IARRLRQTDAELAALRESQLRQEQLIALGTASAQMSHQLATPLASLRLLLDEVAEGDTEP 241
           +A  LR+ +   A  RE  LR EQL+A+ T +A  +H+L TPLA++ +LL E+ +   +P
Sbjct: 177 MAEELRRQEELRAIRREEGLRDEQLLAVATQAAGAAHELGTPLATMSVLLKEMRQDHPDP 236

Query: 242 GLVAEMDL---ALTRCETSLNSLREATEAIRERKLTVVSAGQLLHLLKQQVLLLMPDVVM 298
            L  ++ +    +  C+ +L  L  A EA R   + + +    L     +  L+ P+   
Sbjct: 237 ALQDDLGVLQDQVKLCKETLQYLVRAAEANRRLDIDMQAVTFWLDEALNRWHLMRPEASY 296

Query: 299 DISLSDEVAGARLSTDVSLLPSLLALVDNGAKASKKHGGEARVWLSARLVNEACIRLDIR 358
            +    +    R++    L  +LL L++N A A   +   A  W      N   + + IR
Sbjct: 297 RLQHLGKGVVPRMAPPPDLTQALLNLLNNAADACPDNLEVALDW------NAYEMTICIR 350

Query: 359 DAGPGIDAQKLTALGARPVLSE--QGLGMALMLSHASLERLGGELHLGNLPEGGCLASVR 416
           D G G+       +G +P  +   +GLG+ L LS AS+ R GG + L     GG L  +R
Sbjct: 351 DHGAGVPLAIAEQIG-KPFFTTKGKGLGLGLFLSKASVTRAGGSVKLYPHEGGGTLTELR 409

Query: 417 LP 418
           LP
Sbjct: 410 LP 411