Pairwise Alignments

Query, 808 a.a., exoribonuclease II (RefSeq) from Shewanella amazonensis SB2B

Subject, 769 a.a., ribonuclease R from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  374 bits (960), Expect = e-107
 Identities = 255/759 (33%), Positives = 392/759 (51%), Gaps = 45/759 (5%)

Query: 18  IPSREFILEYLRSQTSPQPRDSIAEALKIHDEERLEALRRRLRAMERDGELVFTRGQCYG 77
           +P ++ ++ +LR   S +  D IA    +   +R  ALR  +R +E +G L     + + 
Sbjct: 12  LPDKDTLVAFLREAGSAEKTD-IARHFGLKGGDR-RALREMIRELEAEGRLGKRGRKGFS 69

Query: 78  LPERMDLMSGTVLGHKDGFG--FFRPDNGGDD----LFINERDMQLYFHGDKVLAQKAGV 131
               +  +    +  +DG G  + R      D    + + ++       GD+VL +    
Sbjct: 70  EAGALPPVGVADVIERDGDGELYVRLVEASPDAPRAILMPDKSKAAPGLGDRVLVKF--- 126

Query: 132 DRRGRR--DARIVRLLSERSAALVGRFYVDAGMAFVVADDKRIPHEILIANEDKNGARHG 189
            +RG    +AR+++ L   +  ++G     A    V   D+R    +++        R G
Sbjct: 127 -QRGAEGWEARLIKKLDVGTNRVLGVIRKSARETRVEPVDRRSKDVLVVPQAQSGDLRDG 185

Query: 190 DVVVIELTRRPGRYVRAGGKVTEVLGKQMAPGMEIEIALRNYDLPHQWSAVIEKKL--RR 247
           D+V+  + +   RY    GK+ E +GK+  P     IA+  + +P  +S  +E++   + 
Sbjct: 186 DLVLAAIEKGDQRYGPKRGKILEHIGKEDDPRAASLIAIHAHGVPTGFSEAVEREAEDQA 245

Query: 248 IPDYVTDEDKEGRVDLRELPLVTIDGEDARDFDDAVYAER----KRGGGWRLWVAIADVS 303
           +P        +GR DLRE+P +TID  DARD DDAVYA R    K  GGW +WVAIADV+
Sbjct: 246 LPTL------KGREDLREVPFITIDPADARDHDDAVYAARDEDPKNEGGWIVWVAIADVA 299

Query: 304 HYVRTDSALDKEARARGNSVYFPSQVIPMLPEKLSNGLCSLNPGVDRLCMVAEMTISAKG 363
            YVR  S LD+EAR +GNS YFP +V PMLPE LSNGLCSL  G +R C+   M     G
Sbjct: 300 AYVRPGSQLDREARDKGNSTYFPDRVEPMLPEVLSNGLCSLKEGENRACLAVRMVFDKDG 359

Query: 364 GLSGYKFYPAVMHSHARFTYTQVAAMLEGGEVKDEHKALFPHLKVLQELYLCLDEQRAER 423
             + ++F   +M SHA+ +Y Q  A ++G         +   L  L   Y  + + R +R
Sbjct: 360 RKTEHRFVRGLMRSHAKLSYEQAQAAIDGQPDDTTGPIMEAILYPLWNAYHAMLKGRLKR 419

Query: 424 GAIAFETLETQFIFNEQRKIDRIVPRARNQAHKIIEECMILANVAAAKFVIKHKGHVLYR 483
             +  E+ E +        I  I  RA  +AH++IEE MI ANV AA+ + + K  ++YR
Sbjct: 420 SPLQIESAERRIRMAPDGGIASIEKRASLEAHRLIEEMMIQANVCAAETLEQKKTPLIYR 479

Query: 484 VHEKPSEQKLTQFKDFLAERGLSMTGGLEPEPADYLALMAQLAGRPDAELIQVMLLRSMR 543
           VH+ PS++K+    DFL+  G     G       +  L+ +      A+++  ++LRS  
Sbjct: 480 VHDTPSQEKIFNLADFLSTIGKPWNKGEPGTTKRFNKLLDETRNTEHADVVNEVVLRSQM 539

Query: 544 QAVYTPDNEGHFGLALEAYSHFTSPIRRYPDLVLHR-VIRYL-LAKERGEASEKWTADGG 601
           QA+Y+P+N GHFGL L+ Y+HFTSPIRRY DL++HR +IR L L K           DG 
Sbjct: 540 QAIYSPENIGHFGLNLDRYAHFTSPIRRYSDLIVHRGLIRALNLGK-----------DGL 588

Query: 602 YHYQLEELDLLGEECSNTERRADEATRDVSDWLKCEFMQDHVGDSFSGVIASVTSFGLFV 661
              ++ EL  + E  + TERR+  A RD  D     ++++HVG +F+G I  VT FGLF+
Sbjct: 589 TDREIAELPAIAEGVTMTERRSMAAERDAMDRYIAAYLEEHVGATFAGRITGVTRFGLFI 648

Query: 662 RLDELFIDGLVHISSLGSDYFQYDPQRQRLIGENSGQIYQIGDPVAVKVASVNLDDRQID 721
           RL++   DGLV +S+LGS+YF +D +   L+GE +G+ + +G  V VK+         + 
Sbjct: 649 RLEDTGADGLVPVSTLGSEYFTHDDRAHALVGERTGKRFTLGRMVEVKLREATPVTGGLV 708

Query: 722 LQMEGERPGRKKAGKKPTTARDRANLEGARTGNGKPGKG 760
            +M  E   R      P     R  + G R G+G P +G
Sbjct: 709 FEMLSEPEPR-----DPNAPAPRYGIRG-RGGDGPPMRG 741