Pairwise Alignments

Query, 326 a.a., tRNA-dihydrouridine synthase A (RefSeq) from Shewanella amazonensis SB2B

Subject, 345 a.a., tRNA dihydrouridine(20/20a) synthase DusA from Escherichia coli ECRC99

 Score =  463 bits (1192), Expect = e-135
 Identities = 222/315 (70%), Positives = 260/315 (82%), Gaps = 1/315 (0%)

Query: 6   NRTFSVAPMLDWTDRHYRYFARLMSKEALLYTEMVTTGAILHGKGDYLAYNQEEHPLALQ 65
           N  FSVAPMLDWTDRH RYF RL+S+  LLYTEMVTTGAI+HGKGDYLAY++EEHP+ALQ
Sbjct: 25  NSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQ 84

Query: 66  LGGSDPKDLATCAKLAEARGYDEVNINVGCPSDRVQNGRFGACLMAEPKLVAECVDAMRQ 125
           LGGSDP  LA CAKLAEARGYDE+N+NVGCPSDRVQNG FGACLM   +LVA+CV AMR 
Sbjct: 85  LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRD 144

Query: 126 QVSVPVTVKTRIGIDEQDSYGFLTDFVETVSAAG-CDTFIIHARKAWLQGLSPKENREIP 184
            VS+PVTVKTRIGID+QDSY FL DF+ TVS  G C+ FIIHARKAWL GLSPKENREIP
Sbjct: 145 VVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREIP 204

Query: 185 PLDYERVYQLKRDYPQLSISINGGVTSIEQAKTHLAQLDGVMVGREAYQNPYILASVDTE 244
           PLDY RVYQLKRD+P L++SINGG+ S+E+AK HL  +DGVMVGREAYQNP ILA+VD E
Sbjct: 205 PLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQHMDGVMVGREAYQNPGILAAVDRE 264

Query: 245 LCGKPAVVSSREEVIGKLLPYIGKHLADGGRLNHISRHIIGLYQGLPGSRAWRRHLSENA 304
           + G     +    V+  + PYI + L+ G  L HI+RH++GL+QG+PG+R WRR+LSENA
Sbjct: 265 IFGSSDTDADPVAVVRAMYPYIERELSQGTYLGHITRHMLGLFQGIPGARQWRRYLSENA 324

Query: 305 HKPGAGIEVIENAIK 319
           HK GA I V+E+A+K
Sbjct: 325 HKAGADINVLEHALK 339