Pairwise Alignments

Query, 326 a.a., tRNA-dihydrouridine synthase A (RefSeq) from Shewanella amazonensis SB2B

Subject, 336 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  357 bits (917), Expect = e-103
 Identities = 171/317 (53%), Positives = 232/317 (73%), Gaps = 1/317 (0%)

Query: 7   RTFSVAPMLDWTDRHYRYFARLMSKEALLYTEMVTTGAILHGKGD-YLAYNQEEHPLALQ 65
           + F+VAPM+DWTD   R+  R +SK ALL+TEM+   AI+HG+ +  L Y+ +EHP+ALQ
Sbjct: 11  KIFAVAPMIDWTDTRCRFLHRQLSKRALLFTEMIVADAIIHGQREKLLGYHPQEHPVALQ 70

Query: 66  LGGSDPKDLATCAKLAEARGYDEVNINVGCPSDRVQNGRFGACLMAEPKLVAECVDAMRQ 125
           LGGS+P  LA   ++A   GYDE+N+NVGCPSDRVQ+G FGACLM EP++VA+C+ AM+ 
Sbjct: 71  LGGSNPAKLAEAVRIAGDYGYDEINLNVGCPSDRVQSGTFGACLMREPEVVAQCISAMKA 130

Query: 126 QVSVPVTVKTRIGIDEQDSYGFLTDFVETVSAAGCDTFIIHARKAWLQGLSPKENREIPP 185
             +VPVTVK RIG+D+Q+    L DF+  V AAG D   +HARKAWLQGLSPKENRE+PP
Sbjct: 131 VAAVPVTVKCRIGVDDQEPETVLPDFLARVVAAGADAVWVHARKAWLQGLSPKENREVPP 190

Query: 186 LDYERVYQLKRDYPQLSISINGGVTSIEQAKTHLAQLDGVMVGREAYQNPYILASVDTEL 245
           LDY+ VY++KRD P + I INGG+  ++QA  HL  +DGVM+GR AY N  ILA VD  +
Sbjct: 191 LDYDLVYRMKRDNPDVFIGINGGIADLDQAGEHLKYVDGVMLGRAAYHNTSILADVDHRI 250

Query: 246 CGKPAVVSSREEVIGKLLPYIGKHLADGGRLNHISRHIIGLYQGLPGSRAWRRHLSENAH 305
            G+ A+      +   ++ Y   ++A GGRLNH++RH++GL+QG+PG+R +R+ LS +A 
Sbjct: 251 HGEEALQYDWMALRDTMMAYAADYIATGGRLNHVTRHMVGLFQGMPGARRFRQILSSDAT 310

Query: 306 KPGAGIEVIENAIKAME 322
           +PGAG EVIE A  A++
Sbjct: 311 RPGAGPEVIEAAFAAID 327