Pairwise Alignments

Query, 293 a.a., membrane protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 294 a.a., DMT family transporter from Pseudomonas fluorescens SBW25

 Score =  144 bits (362), Expect = 3e-39
 Identities = 89/287 (31%), Positives = 145/287 (50%), Gaps = 1/287 (0%)

Query: 6   SGLLELHSAVLLFGGTALFSKLIPLGALDITVYRCAIAALVLALIVK-ATRHSLRLGNKR 64
           S L  LH   L+FG T +F KL       I   R   A + LA+  + A+  + +   +R
Sbjct: 5   SALGALHIGALMFGLTGVFGKLAAASPAIIVFGRAVFAVVALAVFARFASNTAWKTLERR 64

Query: 65  DYGIALALGVIVSLHWVTYFASMQMSSVAIGMIAFFTYPVMTVLVEPLINGTRPHLRDLV 124
           D+   L  GV+++ HWVT+F +++++ VA+  + F  +P  TV++E LI   R    ++V
Sbjct: 65  DWRRLLVSGVLLAAHWVTFFIAVKVAGVAVATLGFTAFPAFTVILEGLIFRERIRANEIV 124

Query: 125 CGVAVLTGVALLIPEASLGNDITLGILVGVLSAALFTARNLLHKRYFAQYTGPQAMFYQT 184
             V V  G+ L+ P+ +L ++ T G+L G+ S  LF+  +L ++    +    QA   Q 
Sbjct: 125 LVVLVSVGLVLVTPDFNLASEATGGLLWGIASGLLFSLLSLNNRASSGRIPAVQAALCQN 184

Query: 185 LVAVLFLGSFVESTPPEVTSDVWQLLILLGVIFTATPHALFTSALRHLSAKTVGLVSCLQ 244
           +V  + L         EV +  W  + LLGV  T   H+LF ++L  + A+T  +V  ++
Sbjct: 185 VVVAVCLLPVAAPGLTEVRAIDWLWIGLLGVFCTGLAHSLFVASLAVIKARTASVVFAME 244

Query: 245 PFYGTVLALLLLGETVNLSTLLGGLLVVSTAVYETAQSHRQQRQKKA 291
           P YG   A LL  ET  L  LLGG+L++   V         Q ++ A
Sbjct: 245 PVYGITAAWLLFAETPTLRMLLGGVLIIVAIVLSGLMGSASQAKQPA 291