Pairwise Alignments

Query, 293 a.a., membrane protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 295 a.a., threonine/homoserine exporter RhtA from Escherichia coli ECRC98

 Score = 64.3 bits (155), Expect = 3e-15
 Identities = 72/281 (25%), Positives = 121/281 (43%), Gaps = 24/281 (8%)

Query: 19  GGTALFSKLIPL-GALDITVYRCAIAALVLALIVKATRHSLRLGNKRDYGIALALGVIVS 77
           GG +L   L PL GA  +T  R A+  L+L    K  R  LR   ++   + L  GV + 
Sbjct: 26  GGASLAKSLFPLVGAPGVTALRLALGTLILIAFFKPWR--LRFAKEQRLPL-LFYGVSLG 82

Query: 78  LHWVTYFASMQMSSVAIGMIAFFTYPVMTVLVEPLINGTRPHLRDLVCGVAVLTGVALLI 137
                ++ S+Q   + I +   FT P    L   L +  RP   D V  V  + G+  L+
Sbjct: 83  GMNYLFYLSIQTVPLGIAVALEFTGP----LAVALFSSRRPV--DFVWVVLAVLGLWFLL 136

Query: 138 PEASLGNDITLGILVG---VLSAALFTARNLLHKRYFAQYTGPQAMFYQTLVAVLFLGSF 194
           P   LG D++   L G    L A    A  +L  +      GP  +   +L+A L    F
Sbjct: 137 P---LGQDVSHVDLTGCALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALI---F 190

Query: 195 VESTPPEVTSDVWQLLIL-----LGVIFTATPHALFTSALRHLSAKTVGLVSCLQPFYGT 249
           V     +    +W   ++     + ++ TA P++L   AL  L  +T G +  ++P    
Sbjct: 191 VPIGALQAGEALWHWSVIPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAA 250

Query: 250 VLALLLLGETVNLSTLLGGLLVVSTAVYETAQSHRQQRQKK 290
           V  ++ LGET+    LL    +++ ++  T    ++ + K+
Sbjct: 251 VSGMIFLGETLTPIQLLALGAIIAASMGSTLTVRKESKIKE 291