Pairwise Alignments

Query, 293 a.a., membrane protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 306 a.a., Predicted permeases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  104 bits (260), Expect = 2e-27
 Identities = 69/290 (23%), Positives = 143/290 (49%), Gaps = 10/290 (3%)

Query: 9   LELHSAVLLFGGTALFSKLIPLGALDITVYRCAIAALVLALIVKATRHSLRLGNKRDYGI 68
           L LH  VL++G TA+   LI + A++I  YR  +A+++L +I       +++  K + G 
Sbjct: 10  LMLHLTVLIWGFTAILGLLIVIPAVEIVFYRTLLASVMLGVIFMIQGRHVKMPVK-ELGK 68

Query: 69  ALALGVIVSLHWVTYFASMQMSSVAIGMIAFFTYPVMTVLVEPLINGTRPHLRDLVCGVA 128
            +  G+++ LHW+ +F + ++S+ ++ +    T  + T  +EP +N ++    +++ G+ 
Sbjct: 69  VIGTGMLIGLHWILFFGAARVSTASVCLAGVATCSLWTAFIEPWVNHSKIKWYEVMLGIM 128

Query: 129 VLTGVALLIP-EASLGNDITLGILVGVLSAALFTARNLLHKRYFAQYTGPQAMFYQTLVA 187
           VL G+ ++   E      + + I    L A    +   L K++ A       M    L +
Sbjct: 129 VLVGLYVIFRFEVQHWKGLAMAIGAAFLGACFTVSNGQLTKKHAAYVITFYEMIGACLFS 188

Query: 188 VLFLGSFVESTPPEVTSDV------WQLLILLGVIFTATPHALFTSALRHLSAKTVGLVS 241
           +LF+  +V+    E    +      W  L+LLG + T    ++    +R LS   + L  
Sbjct: 189 LLFMPIYVQFWAGEEGLQLVPAPMDWFWLLLLGGVCTVYAFSVSVELMRRLSVFVINLTV 248

Query: 242 CLQPFYGTVLALLLLGETVNLST--LLGGLLVVSTAVYETAQSHRQQRQK 289
            L+P YG +LA+L+ G+   ++    +G L+++++ +     +   +R+K
Sbjct: 249 NLEPVYGIILAVLIFGDQEKMTPGFYMGTLIILASVIMYPVFNFLYRRKK 298