Pairwise Alignments

Query, 650 a.a., DNA mismatch repair protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 606 a.a., DNA mismatch repair protein MutL from Agrobacterium fabrum C58

 Score =  252 bits (643), Expect = 4e-71
 Identities = 168/420 (40%), Positives = 237/420 (56%), Gaps = 20/420 (4%)

Query: 1   MAIQVLPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIDIDKGGSKLIRIRDNG 60
           MAI+ L   L NQIAAGEV+ERP+S  KELVEN++DAGATR++I    GG  L+RI DNG
Sbjct: 1   MAIKQLSETLINQIAAGEVIERPSSATKELVENAIDAGATRIEIATAGGGKGLVRITDNG 60

Query: 61  GGIPKAELALALARHATSKVQTLEDLEAILSFGFRGEALASISSVSRLTLTSRTTEQAEA 120
            G+  A+L LA+ RH TSK+ T   L+ I + GFRGEAL SI SV++LT+TSR     + 
Sbjct: 61  SGMSPADLELAVRRHCTSKIST--TLDDIRTLGFRGEALPSIGSVAKLTITSRQQGAEQG 118

Query: 121 WQAYAEGSEVAIRVMPAAHPVGTTIEVADLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180
                 G +V+  V PAA   GT +EV DLFF TPAR +FLK+++ E   I E +KR+A+
Sbjct: 119 SVISVTGGKVS-DVRPAASNAGTIVEVRDLFFATPARLKFLKTERAEAAAITEVVKRMAI 177

Query: 181 IRSDVHFSLSHNGKPVRQYRCAATDTQYLQRLAQVAGRAFADSAIKVDCQHDGMGLSGYL 240
               + F LS  G         +T   +L R+AQ+ G  F D+AI++D   + + L+G+ 
Sbjct: 178 AFPHIRFVLS--GTDRSTLEIPSTGDDHLARMAQILGAEFKDNAIEIDAGREDVTLTGFA 235

Query: 241 QSPALSDMVDCH-YFYVNGRLIRDRLVNHAVRQAFGE-LGTFEQPAFVLSLTLDPHQVDV 298
             P  +     H Y +VNGR ++D+L+  A+R A+ E +     P  VLS+TLDP  VDV
Sbjct: 236 GVPTFNRGNSSHQYVFVNGRPVQDKLLLSAIRGAYAETVPHGRYPVAVLSITLDPAFVDV 295

Query: 299 NVHPAKHEVRFHQARYVHDFILQVLQSALSQMQDLPLAEELPRAQESPAS--VREHTAGY 356
           NVHPAK +VRF     +   I+  ++ AL++  D        RA  + AS  +     GY
Sbjct: 296 NVHPAKSDVRFRDPGLIRGLIVGAIRQALTRDGD--------RAATTGASQMMNAFRPGY 347

Query: 357 APYTFN-RDAATEAAGVLSSLPDTQRSQRQPEKAASGQRSSV--DAGLSQGSSAHRASQT 413
           +P       +AT +A    S P       Q  +AA  + S +      ++   A+ ASQ+
Sbjct: 348 SPSGLRPSPSATWSAATSPSRPLAVSGDMQFAEAAQSRFSDITMPTARAEPREAYEASQS 407