Pairwise Alignments

Query, 315 a.a., SUA5/YciO/YrdC family translation initiation protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 325 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  173 bits (438), Expect = 6e-48
 Identities = 122/314 (38%), Positives = 158/314 (50%), Gaps = 10/314 (3%)

Query: 8   ISLAVAALNRGELVAMPTETVYGLAADAGNADAVAKVFALKGRPATNPLIVHVADASWIN 67
           +  +VA L  G  +A+PTETVYGLAADA N  A+ +++  KGRP  NPLI H+AD +   
Sbjct: 15  LQASVAELADGRPIALPTETVYGLAADATNPAAITRIYETKGRPQFNPLICHMADIAMAE 74

Query: 68  DWASDVGQDAEALMAAFWPGPLTLVLPAK--TYVSRAVTAGQNTVALRMPAHPQALALLK 125
            +A      +  L  AFWPGPLTLVLP K  + +    TAG +TV +R+P    A  L++
Sbjct: 75  RYAV-FDPISRKLAEAFWPGPLTLVLPLKPESDIHSLATAGLDTVGIRVP-QGFASDLIR 132

Query: 126 DFGRALVAPSANKYMSISPTSSDHVARQFAGDELLILEGGNCRVGLESTIVALLPGDEPR 185
            FG+ L APSAN    ISPTS+ HV         L+L+GG   VG+ESTIV +      R
Sbjct: 133 RFGKPLAAPSANSSGKISPTSAAHVEADLGQKINLVLDGGAAAVGVESTIVKVEQDGRVR 192

Query: 186 LLRPGMVSVASIEAVLG----RPVAQQSGGVVAPGQHHKHYSPGLPCYRYGAESDVSHLL 241
           LLRPG +    IE + G    RP  + S  + APG    HY+PG    R GA S +    
Sbjct: 193 LLRPGGIVTEEIERLAGVRLERP-KKASAAIEAPGMLASHYAPG-ATVRLGATSVLPDEA 250

Query: 242 QANDIGWIFCGNAVPVAGKAIELGADPDAYAQGLYDALYQLDHETLSAIYIAEPPHSSEW 301
                G    G         +    D    A  L+D L   D      I I   P     
Sbjct: 251 LIRFGGIAISGEETARTILDLSPSGDLAEAAANLFDYLKAADASGADTIAITAIPTHGLG 310

Query: 302 QAVQNRLERAAKPR 315
           +A+ +RL RAA PR
Sbjct: 311 EAINDRLSRAAAPR 324