Pairwise Alignments
Query, 1763 a.a., sensory box histidine kinase/response regulator (RefSeq) from Shewanella amazonensis SB2B
Subject, 1236 a.a., sensory box histidine kinase/response regulator (RefSeq) from Shewanella amazonensis SB2B
Score = 491 bits (1264), Expect = e-142
Identities = 312/795 (39%), Positives = 452/795 (56%), Gaps = 34/795 (4%)
Query: 762 KLAQERIEQSREQLETITESVPSTVYQLVWRSERDRRFTFLSSAAMATLGFHRNEV--LD 819
K ER E+ L ++ +S+P + +++ + + AA LGF E+ L
Sbjct: 447 KETTERREREYALLRSLLDSIPEAIVF----KDKEGHYLGCNKAAERMLGFSEAEMIGLS 502
Query: 820 NFELVAERIVEEDRGEIIQMLAGRHGMQWTKAFRYHFPSGELRWLEA---GARGSKQQDA 876
+ EL + R E Q+L R +++ + L L+ RG
Sbjct: 503 SEELTSPEQGSRIRAEDEQVLTERKPLRYQEKIELAGKPVLLDTLKLPFYNRRGELMGLI 562
Query: 877 LVWNGYLMDISGRKRMETELAQSEAHFRALFDNAGIGIVN--LDDRGIIKDCNGQFVSDL 934
VW D++ +L SE + D G+ + LD II CN + S L
Sbjct: 563 AVWR----DVTREYESAEQLRLSEERYHLAMDAVEDGLWDWYLDSEQII--CNPAYYSML 616
Query: 935 GISSDSLKR--KQLADLMHPEDRALATGLYQALAESEQGSISGEWRMLDGDGELMWMAVI 992
G ++ + L+HP+DR + + G+ E+RM G+ WM
Sbjct: 617 GYKTNEFPALLSTIDSLIHPDDRIRVQEYREQYLKDPIGAYEIEFRMRAKTGQYHWMLSR 676
Query: 993 ASVLE-EGDGGERSVVMSIANITRLKLLSDELMAAKEDADAANQAKSDFLANMSHEIRTP 1051
V+E D + +V + +ITR K L+ AK+DA+ AN KS+FLANMSHEIRTP
Sbjct: 677 GRVVEFTQDAQPKRMVGTHKDITRHKSNEVALLEAKQDAELANLYKSEFLANMSHEIRTP 736
Query: 1052 MNAIIGMSQLCLQTELDRKQRNYVEKIERASKSLLGIINDILDFSKIEAGKLDIEVVPFQ 1111
MNAIIGM QL +T L +Q++Y++K +++SLL IINDILDFSKIEAGKL++E V F
Sbjct: 737 MNAIIGMLQLAGRTSLTEQQKDYLDKASFSAQSLLRIINDILDFSKIEAGKLELEKVAFP 796
Query: 1112 LDTILEDLGDMFSVKAADKQLELLFSVAPGVPTHLEGDPLRLSQVLINLMNNAIKFTERG 1171
LD +L+ D+ +++A +K +ELL L+GDPLRL QVLINL++NA+KFT+ G
Sbjct: 797 LDKVLDHSLDLNALRAQEKGIELLLYAPVSAGIMLKGDPLRLGQVLINLLSNAVKFTQNG 856
Query: 1172 EVMLSISELARDEDQVQLKFAVRDSGIGLTAEQQAKLFKSFSQADTSTTRKYGGTGLGLA 1231
E+ L ++ + ++ LKF VRD+GIG++ EQQ KLF +F+QAD STTRKYGGTGLGL+
Sbjct: 857 EIELGCEDVGERDHRITLKFWVRDTGIGISREQQDKLFDAFAQADGSTTRKYGGTGLGLS 916
Query: 1232 ICKQLVELMGGEIGVDSQFGNGSTFYFTVSVKVAQNAQ---LNVEQELEGMAVLVVDDNS 1288
I K LV +MGG + V+S+ G GSTF FTVS ++A+ A+ + V + L + LVVDDN
Sbjct: 917 ISKHLVSMMGGTMQVESEPGVGSTFSFTVSFEIAEEAKVVPMVVPERLASLRTLVVDDNP 976
Query: 1289 TARDILRTTLQSMGFSVDSARSGMEALEKCAERDYRIALIDWKMPEMDGTETAARMRE-- 1346
TA I + ++ F V++A +G EAL K ++ + L+DW MPEMDG + + E
Sbjct: 977 TALQIYSSVMRDFHFEVETASTGAEALYKLCKQQVDLVLLDWMMPEMDGIQVIDAIDEMV 1036
Query: 1347 ----LKQPPLILMVSAHANSEFIDKVEEMGINGYITKPISASRLLDGIMSALGRQGHKPV 1402
L P+I++++A+A ++ + + KP AS L D I+ A P
Sbjct: 1037 AEGKLAARPVIIIMTAYAAEPLKVDLDSDRVFAMLQKPFKASSLFDEIIRAFA-----PP 1091
Query: 1403 RRKAQPMDAQKLSGLKGKRILLVEDNEMNQEVASEFLEQVGVVLSIADNGQIALEKLGQQ 1462
KA P + G +LLVEDN +NQ+VA+E L+ G + +ADNGQI+LE +G++
Sbjct: 1092 APKALPAPPVEDEGEHQGVVLLVEDNFINQQVATELLKSAGYEVDVADNGQISLEMVGKR 1151
Query: 1463 SFDLVLMDCQMPVMDGYQATRELRKLPGLAELPVVAMTANAMAGDKEMCLLAGMNDHIAK 1522
S+D +LMD QMPVMDG A ELRK ELP++AMTA+AM+GD+E L AGMN HI K
Sbjct: 1152 SYDAILMDIQMPVMDGLTAATELRKRYSFDELPIIAMTAHAMSGDREKSLAAGMNAHITK 1211
Query: 1523 PIEVGILYQTLLQYL 1537
PI + L++TL ++
Sbjct: 1212 PIVLNELFETLSHWI 1226
Score = 68.6 bits (166), Expect = 5e-15
Identities = 45/128 (35%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 1273 EQELEGMAVLVVDDNSTARDILRTTLQSMGFSVDSARSGMEALEKCAERDYRIALIDWKM 1332
E E +G+ VL+V+DN + + L+S G+ VD A +G +LE +R Y L+D +M
Sbjct: 1104 EGEHQGV-VLLVEDNFINQQVATELLKSAGYEVDVADNGQISLEMVGKRSYDAILMDIQM 1162
Query: 1333 PEMDGTETAARMRE---LKQPPLILMVSAHANSEFIDKVEEMGINGYITKPISASRLLDG 1389
P MDG A +R+ + P+I M +AHA S +K G+N +ITKPI + L +
Sbjct: 1163 PVMDGLTAATELRKRYSFDELPIIAM-TAHAMSGDREKSLAAGMNAHITKPIVLNELFET 1221
Query: 1390 IMSALGRQ 1397
+ +G +
Sbjct: 1222 LSHWIGHK 1229
Score = 64.7 bits (156), Expect = 7e-14
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 516 AVLEAAPEAMLIVDESGQLVFSNSRCQELFGYSGEEMLNLNIDALI-PENERHGHQGKRQ 574
++L++ PEA++ D+ G + N + + G+S EM+ L+ + L PE QG R
Sbjct: 462 SLLDSIPEAIVFKDKEGHYLGCNKAAERMLGFSEAEMIGLSSEELTSPE------QGSR- 514
Query: 575 LFIEGGRDKVMANGKPL---HALKCGGEQFPVQIGLSLLP-ADSRGQRQ-VAASIRDLTE 629
I ++V+ KPL ++ G+ PV + LP + RG+ + A RD+T
Sbjct: 515 --IRAEDEQVLTERKPLRYQEKIELAGK--PVLLDTLKLPFYNRRGELMGLIAVWRDVTR 570
Query: 630 QLAVERQIRESESRFRGLVSNIPGAVYRTRINGTWTMEYVSDNITELTGYPAWHFIESKK 689
+ Q+R SE R+ + + +G W S+ I Y + + K
Sbjct: 571 EYESAEQLRLSEERYHLAMDAVE--------DGLWDWYLDSEQIICNPAY--YSMLGYKT 620
Query: 690 RSFGSLI--LDEDAERCDAIISGALAEQH------AFEVEYRIRHRDGSLRWVHEKGK-A 740
F +L+ +D D I EQ+ A+E+E+R+R + G W+ +G+
Sbjct: 621 NEFPALLSTIDSLIHPDDRIRVQEYREQYLKDPIGAYEIEFRMRAKTGQYHWMLSRGRVV 680
Query: 741 SYDEDGNPVWFDGSLNDITESKLAQERIEQSREQLE 776
+ +D P G+ DIT K + + ++++ E
Sbjct: 681 EFTQDAQPKRMVGTHKDITRHKSNEVALLEAKQDAE 716
Score = 50.4 bits (119), Expect = 1e-09
Identities = 99/455 (21%), Positives = 187/455 (41%), Gaps = 59/455 (12%)
Query: 167 YWTAPYYDDGAGNIQMITFSQP-FGDEEPLGVVTTDLALSSLP--IRLGID-PKKLLVLD 222
+W+ Y D + + T P + ++E +G + D+ L+SL IRL P +++LD
Sbjct: 213 FWSEAYLDSTDKGL-LTTLGVPIYLEDEFIGSINLDMTLASLARQIRLYFKMPGTVILLD 271
Query: 223 ARGTLIYHPD---NNLTRNATISDWLVKDVASEEAAKKVLEGEAQEVALKDLNGVQYLAS 279
++ H D N+L R IS + ++ S + E E + + Y+ S
Sbjct: 272 QSNNILSHSDMAGNDLKRVLHISQKIPSELHS------LPESELFDAQGGIIRNGYYIHS 325
Query: 280 IAKVSPLAWRVLVITPQTELVETFLKGFSSLTLSLLVLALILLVT--------SYYS-AK 330
+A + WR+L I +L + LT L+VLAL +LVT S+ S A
Sbjct: 326 VA-LHNAPWRLLYIQDVDDLFQESWDKLQ-LTFILVVLALSVLVTIVHWQTRRSFVSPAS 383
Query: 331 RLTEPLEA-----------LETGIVDFSKGLIKRLQKPEGVVREIATLSHKFNEMAEVLE 379
RL LE + G + + + + ++ + + +A + + +++
Sbjct: 384 RLLSHLEGCSQQPRAVPEKITPGWEPWFQLVSRIFEENQQYTKHLAEQNKRLDKLVARRT 443
Query: 380 EREQALLDSRGNRFA---TLIDGMSDKSFYCSMTPDGNIDQVSAGVEKVLGISP-EVLKR 435
ER + + R +A +L+D + + + +G+ + E++LG S E++
Sbjct: 444 ERLKETTERREREYALLRSLLDSIPEAIVF--KDKEGHYLGCNKAAERMLGFSEAEMIGL 501
Query: 436 KYQRLFS---SNAINEQNWQFMEMALRGEAVPPHQVEMAGADGSLRRLDLFMQPLLDDEG 492
+ L S + I ++ Q + E P E G LD P + G
Sbjct: 502 SSEELTSPEQGSRIRAEDEQVLT-----ERKPLRYQEKIELAGKPVLLDTLKLPFYNRRG 556
Query: 493 QLISVEMLFNDVTEQFSAAAWSNAVLEAAPEAMLIVDE-------SGQLVFSNSRCQELF 545
+L+ + ++ DVT ++ +A E AM V++ + + N +
Sbjct: 557 ELMGLIAVWRDVTREYESAEQLRLSEERYHLAMDAVEDGLWDWYLDSEQIICNPAYYSML 616
Query: 546 GYSGEEM--LNLNIDALIPENERHGHQGKRQLFIE 578
GY E L ID+LI ++R Q R+ +++
Sbjct: 617 GYKTNEFPALLSTIDSLIHPDDRIRVQEYREQYLK 651