Pairwise Alignments
Query, 1763 a.a., sensory box histidine kinase/response regulator (RefSeq) from Shewanella amazonensis SB2B
Subject, 1287 a.a., signal transduction histidine kinase-like protein (RefSeq) from Shewanella amazonensis SB2B
Score = 443 bits (1140), Expect = e-128
Identities = 315/869 (36%), Positives = 468/869 (53%), Gaps = 65/869 (7%)
Query: 904 RALFDNAGIGIVNLDDRGIIKDCNGQFVSDLGISSDSLKRKQLADLMHPEDRAL--ATGL 961
R + D A I+ D GII N LG ++ + Q + H E+ + AT L
Sbjct: 389 RTILDAASYAIIATDTEGIITVFNPSAERLLGFTAKEMVGLQTPAIFHLEEEVVRRATQL 448
Query: 962 YQAL------------AESEQGSI-SGEWRMLDGDGELMWMAVIASVLEEGDGGERSVVM 1008
+ L A+S +G + W + G + + + + L D +
Sbjct: 449 SEELGTKIEPGFDAFVAKSRRGKEDTNNWTYVSKSGARITVKLSVTTLYGEDKDIMGYLG 508
Query: 1009 SIANITRLKLLSDELMAAKEDADAANQAKSDFLANMSHEIRTPMNAIIGMSQLCLQTELD 1068
++T EL A+E A A++AKSDFLANMSHEIRTPMNA++G+ Q+ LQTEL
Sbjct: 509 IAYDLTEQLKREQELADAREQALQASRAKSDFLANMSHEIRTPMNAVLGLLQMTLQTELP 568
Query: 1069 RKQRNYVEKIERASKSLLGIINDILDFSKIEAGKLDIEVVPFQLDTILEDLGDMFSVKAA 1128
+ R+Y+EK ++A+KSLL ++NDILDFSKIEAG++++E F L +L D+G + S +
Sbjct: 569 PRPRDYLEKTQQAAKSLLALLNDILDFSKIEAGRIELERQGFSLQQLLGDMGSILSSQVQ 628
Query: 1129 DKQLELLFSVAPGVPTHLEGDPLRLSQVLINLMNNAIKFTERGEVMLSISELARDEDQVQ 1188
K +EL++ VAP VP L GD LRL Q+L+N++ NAIKFTE+G+++ I D+
Sbjct: 629 QKDIELVYQVAPSVPDQLIGDSLRLRQILLNVLTNAIKFTEKGDIITRIDADLGDDGTCH 688
Query: 1189 LKFAVRDSGIGLTAEQQAKLFKSFSQADTSTTRKYGGTGLGLAICKQLVELMGGEIGVDS 1248
L ++DSGIG+T EQQA +FK FSQAD+S +R+YGGTGLGLAI ++LV LM GEI V S
Sbjct: 689 LHIEIQDSGIGMTNEQQAIIFKGFSQADSSISRRYGGTGLGLAITRELVHLMQGEIRVTS 748
Query: 1249 QFGNGSTFYFTVSVKVAQNA-QLNVEQELEGMAVLVVDDNSTARDILRTTLQSMGFSVDS 1307
G GST FT+ V++ +A + G+ VL+V+DN T+R + L+ +G V +
Sbjct: 749 SPGVGST--FTIDVQLGFDATKYRPGARFSGVRVLLVEDNHTSRLVFSELLRDLGCEVTA 806
Query: 1308 ARSG---MEALEKCAERDYRIALIDWKMPEMDGTETAARMREL----KQPPLILMVS-AH 1359
+G M+ +E+ A + + L DW++P +DG E A+ +R L +QP +I++ + +
Sbjct: 807 LNNGLTAMKTIERMAPDSFDVLLADWQLPGLDGLELASWIRHLDSLSRQPGIIIVTAFSQ 866
Query: 1360 ANSEFIDKVEEMGINGYITKPISASRLLDGIMSALGRQGHKPVRRKAQPMDAQKLSGLKG 1419
A E K E + + KP++ + + S L R + + + L G
Sbjct: 867 AMLEAQLKHREEEFDATLIKPVTREMVSRCLQSVLERHNNDGLDMLSH---LPLAPSLVG 923
Query: 1420 KRILLVEDNEMNQEVASEFLEQVGVVLSIADNGQIALEKLGQQSFDLVLMDCQMPVMDGY 1479
+R+LLVEDN N+ VA+ L Q+G + A +G AL+ L +Q FDLVLMD QMP MDGY
Sbjct: 924 RRLLLVEDNATNRLVATSLLGQLGAEVIEAVDGFQALKLLSRQQFDLVLMDIQMPGMDGY 983
Query: 1480 QATRELRKLPGLAELPVVAMTANAMAGDKEMCLLAGMNDHIAKPIEVGILYQTLLQYLCP 1539
Q TR++R L +LP++AMTANAM DK+ C AGMN HI+KP E+ + LLQYL P
Sbjct: 984 QTTRKIRNELMLTDLPIIAMTANAMPEDKQACRDAGMNCHISKPFEIDEVATKLLQYLSP 1043
Query: 1540 EAKGLESADADAAADQEVT---SLTSWPE------HEDLDI----------DRGLQLVQN 1580
+ S ++A A+ E T SLT+ PE H D GL L +
Sbjct: 1044 PEHPMRS--SEALAEDESTSAGSLTAAPEAAVTEMHNPKDALPQSVRQFSQANGLDLEEA 1101
Query: 1581 SER-----LYRRILERFVTSQAQAGKKIRKALALGQ--QEDAVRLAHTLKGVAGNLSADT 1633
R L+ R++++F+ +QA ++ L++ + +DA H+LK A +
Sbjct: 1102 CNRLGDRELFTRVIDQFLLDISQA----QRCLSVPEIAMKDARIQYHSLKSGAASCGFTA 1157
Query: 1634 LVEEARQLEAKL-AQGEACEAELEAVETRLVTIVAAIER---WMTEGVEEQGVESGEPLS 1689
L R EA + E A EAV L ++ +E+ ++ V+ S L
Sbjct: 1158 LALVLRNAEANCRPEAELRVAPDEAVLRALPEAISQLEQLQPLLSPQVQSGAAASQNLLP 1217
Query: 1690 ADALKEVLNTLVTQLEDADADAVSTLESL 1718
L L TL L +D A+ L +L
Sbjct: 1218 QAELSAQLITLQQLLSQSDMAALDLLANL 1246
Score = 39.3 bits (90), Expect = 3e-06
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 456 MALRGEAVPPHQVEMAGADGSLRRLDLFMQPLLDDEGQLISVEMLFNDVTEQFSA-AAWS 514
M +R V H+ E+A A+ + LL + +L E L ++ T Q
Sbjct: 341 MWMRRAVVLQHRRELASAEE---------KALLSAKAKL---EQLVHERTSQLEKMGVLQ 388
Query: 515 NAVLEAAPEAMLIVDESGQLVFSNSRCQELFGYSGEEMLNLNIDALIPENE---RHGHQG 571
+L+AA A++ D G + N + L G++ +EM+ L A+ E R Q
Sbjct: 389 RTILDAASYAIIATDTEGIITVFNPSAERLLGFTAKEMVGLQTPAIFHLEEEVVRRATQL 448
Query: 572 KRQLF--IEGGRDKVMANGKPLHA-------LKCGGEQFPVQIGLSLLPADSRGQRQVAA 622
+L IE G D +A + + G + V++ ++ L + +
Sbjct: 449 SEELGTKIEPGFDAFVAKSRRGKEDTNNWTYVSKSGARITVKLSVTTLYGEDKDIMGYLG 508
Query: 623 SIRDLTEQLAVERQIRESESR 643
DLTEQL E+++ ++ +
Sbjct: 509 IAYDLTEQLKREQELADAREQ 529