Pairwise Alignments

Query, 1763 a.a., sensory box histidine kinase/response regulator (RefSeq) from Shewanella amazonensis SB2B

Subject, 1231 a.a., two component sensor kinase/response regulator hybrid from Agrobacterium fabrum C58

 Score =  314 bits (805), Expect = 4e-89
 Identities = 206/614 (33%), Positives = 332/614 (54%), Gaps = 46/614 (7%)

Query: 968  SEQGSISGEWRM-LDGDGELMWMAVIASV----LEEGDGGERSVVMSIANITRLKLLSDE 1022
            +E G     WR  +  +    W+  +A      LE  +      ++ + ++T +K+  +E
Sbjct: 608  AEAGETLRIWRENIAANRPFSWLVHVAGKSWLNLEATNSSGNYWLIIVTDVTEMKVREEE 667

Query: 1023 LMAAKEDADAANQAKSDFLANMSHEIRTPMNAIIGMSQLCLQTELDRKQRNYVEKIERAS 1082
            L      A+AA++AKS+FLANMSHEIRTPMN ++GM++L  +++LD +Q+ + + I ++ 
Sbjct: 668  LQRLLSRAEAADRAKSEFLANMSHEIRTPMNGVLGMAELLAKSKLDTRQKTFTDIIVKSG 727

Query: 1083 KSLLGIINDILDFSKIEAGKLDIEVVPFQLDTILEDLGDMFSVKAADKQLELLFSVAPGV 1142
             +LL IINDILDFSKIEAG++ +  VPF     +ED+  + S  A +K +EL+  +   V
Sbjct: 728  NALLTIINDILDFSKIEAGQMKLRSVPFDPAEAVEDVVSLLSSAALEKDIELIVRIDASV 787

Query: 1143 PTHLEGDPLRLSQVLINLMNNAIKFTERGEVMLSISELARDEDQVQLKFAVRDSGIGLTA 1202
               + GD  R  Q++ N++ NA+KFTE G V++ +S  + +  +      V DSGIG+  
Sbjct: 788  SGKVIGDAGRFRQIVTNIVGNAVKFTETGHVLVELSAQSAEASESIFSLRVEDSGIGIPV 847

Query: 1203 EQQAKLFKSFSQADTSTTRKYGGTGLGLAICKQLVELMGGEIGVDSQFGNGSTFYFTVSV 1262
            ++   +F  FSQ D S TR++ GTGLGLAI   LV L  G+I V S+ G GS F   +  
Sbjct: 848  DKLETIFDKFSQVDGSATRRHEGTGLGLAITVGLVGLFDGKINVVSEVGRGSAFEVDIPF 907

Query: 1263 KVAQNAQ----LNVEQELEGMAVLVVDDNSTARDILRTTLQSMGF---SVDSARSGMEAL 1315
            +V +  +    L+V   ++ + VLV+DDN   R IL   L+S G    +V++  SG+  L
Sbjct: 908  QVMERRRDVPLLSV--AIDDIRVLVIDDNDVNRRILTEQLRSWGIDGHAVENGPSGIAVL 965

Query: 1316 EKCAERDYRI--ALIDWKMPEMDGTETAARMRELKQPPLILMVSAHANSEFIDKV--EEM 1371
            ++ A   + I   ++D+ MP M+G +   R+R  K+   I +V   +     D+    ++
Sbjct: 966  QEAASLGFAIDAIILDYHMPVMNGLDVVERIRADKRFDDIAIVFLTSMDVVGDETLFTDL 1025

Query: 1372 GINGYITKPISA----SRLLDGIMS-----------ALGRQGHK--PVRRKAQPMDAQKL 1414
             +  ++ KP  A    S L D +             A G  G K  P  R A+     + 
Sbjct: 1026 SVQAHLMKPARARLLRSTLFDVVRDVRLKRIRQHPLAQGTGGEKARPESRPAEKKQRAEA 1085

Query: 1415 SGLKGKR-------ILLVEDNEMNQEVASEFLEQVGVVLSIADNGQIALEKLGQQSFDLV 1467
                 +R       +L+ EDN++NQ V S+ L+Q G+   I  NG+ A++   + +  L+
Sbjct: 1086 PATVPERSRPCLLDVLVAEDNDVNQIVFSQILQQAGLRFLIVGNGKRAVQAWEEYNPALI 1145

Query: 1468 LMDCQMPVMDGYQATRELRKLPGLA----ELPVVAMTANAMAGDKEMCLLAGMNDHIAKP 1523
            LMD  MPVM+G+QAT+ +R     A     +PV+ +TA+    D+E CL AGM+D+++KP
Sbjct: 1146 LMDVSMPVMNGHQATQAIRAAEQAAGDSRHVPVIGVTAHTQEADRERCLEAGMDDYLSKP 1205

Query: 1524 IEVGILYQTLLQYL 1537
            I    L   + Q+L
Sbjct: 1206 ISPESLEDKIAQWL 1219



 Score = 50.1 bits (118), Expect = 2e-09
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 6/121 (4%)

Query: 1281 VLVVDDNSTARDILRTTLQSMGFSVDSARSGMEALEKCAERDYRIALIDWKMPEMDGTET 1340
            VLV +DN   + +    LQ  G       +G  A++   E +  + L+D  MP M+G + 
Sbjct: 1100 VLVAEDNDVNQIVFSQILQQAGLRFLIVGNGKRAVQAWEEYNPALILMDVSMPVMNGHQA 1159

Query: 1341 AARMRELKQPP------LILMVSAHANSEFIDKVEEMGINGYITKPISASRLLDGIMSAL 1394
               +R  +Q         ++ V+AH      ++  E G++ Y++KPIS   L D I   L
Sbjct: 1160 TQAIRAAEQAAGDSRHVPVIGVTAHTQEADRERCLEAGMDDYLSKPISPESLEDKIAQWL 1219

Query: 1395 G 1395
            G
Sbjct: 1220 G 1220