Pairwise Alignments

Query, 229 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 231 a.a., Inner membrane protein YohK from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  119 bits (299), Expect = 4e-32
 Identities = 70/214 (32%), Positives = 120/214 (56%), Gaps = 2/214 (0%)

Query: 10  SLLITLMGYYGAKRLYSCLGYWWAAPILLAPLLIIAAVLLLDIPLPSYFEYTHFLVLLLG 69
           SL +TL+ ++ A++L +   +    P+L+A ++II  ++L  I   SYF+ +  L  LL 
Sbjct: 8   SLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPFLMLTGISYDSYFKGSEVLNDLLQ 67

Query: 70  PATIAFALPIYRERALIR-RYPITLTLGVMAGLLLGLVSSWGLVKLFALPPEIGQSVLVR 128
           PA +A A P+Y +   IR R+   +T+    G ++ +V+   +  L    PEI  S+L +
Sbjct: 68  PAVVALAYPLYEQLHQIRARWKSIITI-CFIGSVVAMVTGTSVALLMGASPEIAASILPK 126

Query: 129 SVSTPFAMEATTAFGGVPELTAMVVLMTGVVGMLLCGPLFRFGRVRSSLARGVALGASAH 188
           SV+TP AM    + GG+P ++A+ V+  G++G +    L    R+R+  ARG+A+G ++H
Sbjct: 127 SVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAVFGHTLLNAMRIRTKAARGLAMGTASH 186

Query: 189 GAGAAKAREYGEEEAVVASLTMIFTGIAMVLGAP 222
             G A+  E   +E   +SL ++  GI   L AP
Sbjct: 187 ALGTARCAELDYQEGAFSSLALVLCGIITSLIAP 220