Pairwise Alignments

Query, 441 a.a., branched-chain amino acid transport system II carrier protein BrnQ (RefSeq) from Shewanella amazonensis SB2B

Subject, 437 a.a., Branched-chain amino acid transport system 2 carrier protein from Pseudomonas sp. RS175

 Score =  348 bits (894), Expect = e-100
 Identities = 183/448 (40%), Positives = 285/448 (63%), Gaps = 22/448 (4%)

Query: 4   KQMSFSDTLSLGFMTFAFFLGAGNLIFPPFAGMLAGENMPLAMMGFLVTAVGMPLVGLIA 63
           K +   D L+LGFMTFA F+GAGN+IFPP  G+ +G ++ +A +GFL+TAVG+P+V ++A
Sbjct: 2   KVLKGQDILALGFMTFALFVGAGNIIFPPIVGLQSGPHVWMAALGFLITAVGLPVVTVVA 61

Query: 64  VAKTQGRVMAY---LPAVAATALAVAIYIIIGPAFAAPRTGLVAFEIGAKPFLGDTSAVL 120
           +AK  G + A    +  VA+  LA   Y+ +GP FA PRT  V+FE+G  P  G++   L
Sbjct: 62  LAKVGGAMDALSSPIGKVASGLLAAVCYLAVGPLFATPRTATVSFEVGLAPLTGESPLAL 121

Query: 121 ALGSISLNVAQLIFTLGFFAVTMLLALFPGKLMDSVGKVLTPVLMVLLLSLAISVIMLPS 180
                      LI++  +F +   ++L+PG+L+D+VG+ L P+ ++ L  L I+   LP+
Sbjct: 122 -----------LIYSAVYFLLVFFISLYPGRLLDTVGRFLAPLKIIALAVLGIAAFALPA 170

Query: 181 GDTSAPVGDYASSPLIKGVIEGYNTMDTLASLMFGMLIIDLLRKKGVDAPADQTRALVRA 240
           G       +Y ++P  +G I GY TMDTL +L+FG++I++ +R +GV++PA  TR  + A
Sbjct: 171 GGIGVATPEYVAAPFSQGFINGYLTMDTLGALVFGIVIVNAIRSRGVESPALITRYAIIA 230

Query: 241 AFIAASGLAFVYISLFFLGATAGDIAQGAENGGQILTRYVDREFGTLGALLLSTVVSLAC 300
             IA  GLA VY+SLF LG+ + ++A GA NG  +L  YV   FG+LG+  L+ ++SLAC
Sbjct: 231 GLIAGVGLALVYVSLFRLGSGSHEVAAGATNGAAVLHAYVQHTFGSLGSGFLAVLISLAC 290

Query: 301 LTTAVGLVSACSDYFNELFPRIKYRQFVILFSIICAVVANVGLTQLISVSIPVLVSVYPV 360
           L TAVGL  AC++YF+ + P + Y+  V++ +    +V+N+GLT+LI+ SIPVL ++YP 
Sbjct: 291 LVTAVGLTCACAEYFSRVLP-LSYKTLVVILAAFSLLVSNLGLTKLIAFSIPVLTAIYPP 349

Query: 361 VIALVAVTFMTQYLPNPKVSHRLVLAVALLFGAIDGLKAAGV---NMESLSFMPLYAEGM 417
            IALVA++F   +          V+ V+ LFG +D LK AG+       L+ +PL  +G+
Sbjct: 350 CIALVALSFCKDFWHEQSRIVGPVMLVSFLFGLVDALKGAGLADWMPAQLAQLPLSEQGL 409

Query: 418 AWLLPTAVTMVICL----FIGKRAPAAA 441
           AWL+P+ +T+V+ +     +GKR+ A A
Sbjct: 410 AWLVPSVMTLVVAVVCDRLLGKRSEALA 437