Pairwise Alignments

Query, 441 a.a., branched-chain amino acid transport system II carrier protein BrnQ (RefSeq) from Shewanella amazonensis SB2B

Subject, 439 a.a., Branched-chain amino acid transport system 2 carrier protein from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  320 bits (821), Expect = 4e-92
 Identities = 170/439 (38%), Positives = 268/439 (61%), Gaps = 18/439 (4%)

Query: 5   QMSFSDTLSLGFMTFAFFLGAGNLIFPPFAGMLAGENMPLAMMGFLVTAVGMPLVGLIAV 64
           Q+   D ++LGFMTFA F+GAGN+IFPP  G+ AGE++  A  GFL+TAVG+P++ ++A+
Sbjct: 4   QLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTVVAL 63

Query: 65  AKTQGRVMAY---LPAVAATALAVAIYIIIGPAFAAPRTGLVAFEIGAKPFLGDTSAVLA 121
           AK  G V +    +  VA   LA   Y+ +GP FA PRT  V+FE+G  P  GD++  L 
Sbjct: 64  AKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSALPL- 122

Query: 122 LGSISLNVAQLIFTLGFFAVTMLLALFPGKLMDSVGKVLTPVLMVLLLSLAISVIMLPSG 181
                      I++L +FA+ +L++L+PGKL+D+VG  L P+ ++ L+ L+++ I+ P+G
Sbjct: 123 ----------FIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIVWPAG 172

Query: 182 DTSAPVGDYASSPLIKGVIEGYNTMDTLASLMFGMLIIDLLRKKGVDAPADQTRALVRAA 241
             S     Y ++    G + GY TMDTL +++FG++I++  R +GV      TR  V A 
Sbjct: 173 SISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAG 232

Query: 242 FIAASGLAFVYISLFFLGATAGDIAQGAENGGQILTRYVDREFGTLGALLLSTVVSLACL 301
            +A  GL  +Y++LF LG+ +  +   + NG  IL  YV   FG  G+ LL+ ++ +ACL
Sbjct: 233 LMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACL 292

Query: 302 TTAVGLVSACSDYFNELFPRIKYRQFVILFSIICAVVANVGLTQLISVSIPVLVSVYPVV 361
            TAVGL  AC+++F +  P + YR  V +      VV+N+GL+QLI +S+PVL ++YP  
Sbjct: 293 VTAVGLTCACAEFFAQYVP-LSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPC 351

Query: 362 IALVAVTFMTQYLPNPKVSHRLVLAVALLFGAIDGLKAAGVNMESLSF---MPLYAEGMA 418
           IALV ++F   +  N        + ++LLFG +DG+KA+  +    S+   +PL  +G+A
Sbjct: 352 IALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAFSDILPSWAQRLPLAEQGLA 411

Query: 419 WLLPTAVTMVICLFIGKRA 437
           WL+PT V +V+ +   + A
Sbjct: 412 WLMPTVVMVVLAIIWDRAA 430