Pairwise Alignments

Query, 1058 a.a., L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) from Shewanella amazonensis SB2B

Subject, 1317 a.a., Bifunctional protein PutA from Pseudomonas sp. DMC3

 Score =  895 bits (2314), Expect = 0.0
 Identities = 503/1000 (50%), Positives = 645/1000 (64%), Gaps = 37/1000 (3%)

Query: 57   AHDLVAKVRQYEKKGLMVGI-DAFLQQYSLETQEGIILMCLAEALLRIPDAETADALIAD 115
            A  +  K+R  +  G   GI    LQ++SL +QEG+ LMCLAEALLRIPD  T DALI D
Sbjct: 126  AATIAEKLRNQKSAGGRAGIVQGLLQEFSLSSQEGVALMCLAEALLRIPDKGTRDALIRD 185

Query: 116  KLSGAKWDEHMSKSDSVLVNASTWGLMLTGKIVQLDKNLDGTPSNLLSRLVNRLGEPVIR 175
            K+S   W  H+  S S+ VNA+TWGL+LTGK+V        T S  LSR++ + GEP+IR
Sbjct: 186  KISTGNWHPHLGNSPSLFVNAATWGLLLTGKLVSTHNEAGLTSS--LSRIIGKSGEPMIR 243

Query: 176  QAMYAAMKIMGKQFVLGRTIEEGLKNAAEKRKLGYTHSYDMLGEAALTMKDADKYYRDYA 235
            + +  AM++MG+QFV G TI E L NA++    G+ +SYDMLGEAALT  DA KY   Y 
Sbjct: 244  KGVDMAMRLMGEQFVTGETIAEALANASKFEAKGFRYSYDMLGEAALTEVDAQKYLASYE 303

Query: 236  NAIQALGTAKFDESEAPRPTISIKLSALHPRYEVANEDRVMTELYATLIKLIEQARSLNV 295
             AI ++G A         P ISIKLSALHPRY  A  +RVM ELY  L+ L   A+  ++
Sbjct: 304  QAIHSIGKASHGRGIYEGPGISIKLSALHPRYSRAQYERVMDELYPRLLSLTLLAKQYDI 363

Query: 296  GIQIDAEEVDRLELSLKLFKKLYQSDAAKGWGLLGIVVQAYSKRALPVLMWLTRLAKEQG 355
            G+ IDAEE DRLELSL L ++L       GW  +G V+QAY KR   V+ ++  LA+   
Sbjct: 364  GLNIDAEEADRLELSLDLLERLCFEPQLTGWNGIGFVIQAYQKRCPYVIDYVIDLARRSR 423

Query: 356  DEIPLRLVKGAYWDSELKWAQQAGEAGYPLFTRKAATDVSYLACARYLLSEATRGVIYPQ 415
              + +RLVKGAYWDSE+K AQ  G  GYP++TRK  TDVSY+ACAR LLS      IYPQ
Sbjct: 424  HRLMIRLVKGAYWDSEIKRAQVEGLEGYPVYTRKVYTDVSYIACARKLLS--VPEAIYPQ 481

Query: 416  FASHNAQTVAAITAMVGDR----KFEFQRLHGMGQELYDTVLAEAAVPTV----RIYAPI 467
            FA+HNA T++AI  + G      ++EFQ LHGMG+ LY+ V+ + +   +    R+YAP+
Sbjct: 482  FATHNAHTLSAIYHIAGQNYYPGQYEFQCLHGMGEPLYEQVVGKVSEGKLNRPCRVYAPV 541

Query: 468  GAHKDLLPYLVRRLLENGANTSFVHKLVDPKTPIESLVTHP------LKTLQGYKTLANN 521
            G H+ LL YLVRRLLENGANTSFV+++ D    I+ LV  P      + T++G   L + 
Sbjct: 542  GTHETLLAYLVRRLLENGANTSFVNRIADQSISIQELVADPVAQIEQMATVEGGFGLPHP 601

Query: 522  KIVKPADIFGAERKNSKGLNMNIISESEPFFAALEKFKDTQWSAGPLVNGETLSGEVRDV 581
            +I  P D++GAER NS G++M           AL       W A P++   + +     V
Sbjct: 602  RIPLPRDLYGAERANSSGIDMANEHRLASLSCALLATAHNDWKAVPMLGCASSNETPVAV 661

Query: 582  VSPYNTTLKVGQVAFANEATIEQAIAGADKAFASWCRTPVETRANALQKLADLLEENREE 641
            ++P +    VG V  A    ++ AI  A  A   W  TP   RA  L++ ADL+E   + 
Sbjct: 662  LNPSDHRDVVGHVQEATVEDVDNAIQCALNAAPIWQATPPAERAAILERAADLMEGEIQP 721

Query: 642  LIALCTREAGKSIQDGIDEVREAVDFCRYYAVQAKKMMSKPELLPGPTGELNELFLQGRG 701
            L+ L  REAGK+  + I EVREAVDF RYYAVQA+   S     P              G
Sbjct: 722  LMGLLAREAGKTYANAIAEVREAVDFLRYYAVQARNDFSNDAHRP-------------LG 768

Query: 702  VFVCISPWNFPLAIFLGQVAAALATGNTVIAKPAEQTCLIGFRAVQLAHEAGIPKDVLQF 761
              VCISPWNFPLAIF GQVAAALA GN V+AKPAEQT L+  +AV+L  EAGIP+ VLQ 
Sbjct: 769  PVVCISPWNFPLAIFSGQVAAALAAGNPVLAKPAEQTPLVAAQAVRLMLEAGIPEGVLQL 828

Query: 762  LPGTGAVVGAKLTSDERIGGVCFTGSTTTAKVINRALAGR---DGAIIPLIAETGGQNAM 818
            LPG G  VGA L  DER+ GV FTGST  A+++ R +AGR    G  IPLIAETGGQNAM
Sbjct: 829  LPGRGETVGAGLVGDERVKGVMFTGSTEVARLLQRNIAGRLDSQGRPIPLIAETGGQNAM 888

Query: 819  VVDSTSQPEQVVNDVVSSAFTSAGQRCSALRVLYLQEDIAERVLDVLKGAMDELTLGNPG 878
            +VDS++  EQVV DVVSSAF SAGQRCSALRVL LQED A+RV+++LKGAM E  LGNP 
Sbjct: 889  IVDSSALTEQVVIDVVSSAFDSAGQRCSALRVLCLQEDSADRVIEMLKGAMAESRLGNPE 948

Query: 879  SVKTDVGPVIDAAAKANLNAHIDHIKQVGRLIHQLSLPEGTE--NGHFVAPTAVEIDSIK 936
             +  D+GPVIDA AKA ++ HI  ++  GR ++Q+++ +  E   G FV PT +E++S  
Sbjct: 949  RLSVDIGPVIDAEAKAGIDKHIQGMRDKGRNVYQVAIADSEEVKRGTFVMPTLIELESFD 1008

Query: 937  VLTKENFGPILHVVRYKAAGLQKVIDDINSTGFGLTLGIHSRNEGHALEVADKVNVGNVY 996
             L +E FGP+LHVVRYK   L ++I  IN++G+GLTLG+H+R +    +V D VN GNVY
Sbjct: 1009 ELQREIFGPVLHVVRYKRKELDQLIGQINASGYGLTLGVHTRIDETIAKVIDNVNAGNVY 1068

Query: 997  INRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLTRFVTEK 1036
            +NRN +GAVVGVQPFGG+GLSGTGPKAGGP YL R ++ +
Sbjct: 1069 VNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLSTR 1108



 Score = 35.4 bits (80), Expect = 3e-05
 Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 25/184 (13%)

Query: 668  CRYYAVQAKKMMSKPELLPGPTGELNELFLQGRGVFVCISPWNFPLAIFLGQVAAALATG 727
            C  YA Q++  +++  +L GPTGE N   +  R   +C++     L   L Q+AA LA G
Sbjct: 1157 CGQYAAQSQSGITR--VLAGPTGEKNSYAILPREHVLCLAEVEGDL---LTQLAAVLAVG 1211

Query: 728  NTVIAKPAEQTCLIGFRAVQLAHEAGIPKDVLQFLPGTGAVVGAKLTSDERI-GGVCFTG 786
             + +    E T          A  A +PK+V   +        A    DE +   V   G
Sbjct: 1212 GSAVWPETELT---------KALFARLPKEVQARIKRV-----ADWNKDEVVFDAVLHHG 1257

Query: 787  STTTAKVINRALAGRDGAIIPLIAETGGQNAMVVDSTSQPEQVVNDVVSSAFTSAGQRCS 846
             +   + + + +A R GAI+ +   + G+  + ++       V+   +S    +AG   S
Sbjct: 1258 HSDQLRGVCQQIAQRGGAIVGVQGLSQGETNIALE-----RLVIERALSVNTAAAGGNAS 1312

Query: 847  ALRV 850
             + +
Sbjct: 1313 LMTI 1316



 Score = 30.4 bits (67), Expect = 9e-04
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 9/53 (16%)

Query: 1003 GAVVGVQPFGGQGLSGTGPKAGGPHYLTRFVTEKTRTNNITAIGGNATLLSLG 1055
            GA+VGVQ    QG +           L R V E+  + N  A GGNA+L+++G
Sbjct: 1274 GAIVGVQGLS-QGETNIA--------LERLVIERALSVNTAAAGGNASLMTIG 1317