Pairwise Alignments

Query, 616 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 367 a.a., YcbX family protein from Dickeya dianthicola 67-19

 Score =  221 bits (562), Expect = 5e-62
 Identities = 126/276 (45%), Positives = 158/276 (57%), Gaps = 6/276 (2%)

Query: 1   MAKLSAIHIYPVKSMGAQSLHQARVCPEGLAGDRRFMVIKPSGDFITARTHPALQLITPL 60
           M  LS + ++PVKSM    L QA     GLA DR FM+ +P G FITAR  P L L TP 
Sbjct: 1   MIVLSRLFVHPVKSMRGIQLSQAMTSASGLAFDRLFMITEPDGTFITARQFPQLVLFTPA 60

Query: 61  GQDEDIHAGRLRLSYPGQPDLTLDVCEFEKAPVKTQVWKDGFEALSIHAQADTWISTLLG 120
              + +      LS P      + V +F  A   T+VW + F+A       + W+S  L 
Sbjct: 61  LTHDGVF-----LSAPDGRTCLVRVDDFAPATAPTEVWGNHFQARIAPEAVNRWLSDYLQ 115

Query: 121 EPARLIWLG-ETSNRFREKLDTRVSFADGYPLLLISEASLADLNLRADAISRMSQFRTNL 179
            P +L W G E S R +   D  + FADGYP LLI++AS  DL  R  A   + QFR NL
Sbjct: 116 RPVQLRWQGPELSRRVKRHPDIPLGFADGYPFLLINDASFDDLRRRCSAGILIEQFRPNL 175

Query: 180 VVSDTEAFAEDGWKRIRIGEVEFLLAKPCSRCVMTTIIPGTDRFHPQGEPLATLSKFRKT 239
            VS  EA+AED W+ +R+GEV F +AKPCSRCV+TT+     R HP GEPLATL ++R  
Sbjct: 176 TVSGAEAYAEDSWQTLRVGEVVFDVAKPCSRCVLTTVSIERGRKHPSGEPLATLQQYRTA 235

Query: 240 QQGDVNFGQNLIALNEGIIHEGDDVVILEEQPGEHY 275
           + GDV+FG NLIA N GII  GD V IL  +P   Y
Sbjct: 236 ENGDVDFGINLIARNSGIIRAGDRVEILAAKPPRPY 271



 Score = 68.6 bits (166), Expect = 5e-16
 Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 6/81 (7%)

Query: 532 IQIGEKG--FVGDNQQSLLTQAEAQGIKLLWSCRAGICGSCKCKLTAGEVHQPKAEALSD 589
           +QI  +G  F G+NQQ LL Q E QGI++ +SCRAG+CG C+  LT GEV   KA     
Sbjct: 290 VQIAYQGQRFTGNNQQILLEQLEQQGIRVPYSCRAGLCGCCRLTLTDGEVSPLKA----G 345

Query: 590 AEREQGIILACCATPLTDVSL 610
           A  E   ILAC   P  D+ L
Sbjct: 346 ARGEDRTILACSCIPAGDIQL 366