Pairwise Alignments

Query, 168 a.a., TRAP-type transport system, small permease component (RefSeq) from Shewanella amazonensis SB2B

Subject, 187 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score =  105 bits (263), Expect = 3e-28
 Identities = 64/162 (39%), Positives = 93/162 (57%), Gaps = 3/162 (1%)

Query: 4   LIGFFEGITEALGRLVGWFTLGMVLMTLAVVVLRYAFATGATALQETALYLHGAVFTLAA 63
           L    + I E +GR V W  L MV+++     +RY F+  + A  E   YL  AVF L A
Sbjct: 7   LSSLIDRINEWVGRSVYWLILLMVIVSSGNATIRYIFSNSSNAWLEVQWYLFAAVFLLCA 66

Query: 64  GFTLKRDAHVRVDVFYRQCSERTRHWIDFVGTLVFLFPLSLAIGLYSFDYVMNAWRIQES 123
           G+TL ++ H+R+DV   +   RT+ WID +GTLVFLFP++L I   S+   M ++ + E 
Sbjct: 67  GYTLLKNEHIRIDVIAGRLPRRTQIWIDILGTLVFLFPMALLILTLSWPMFMKSFTMMEM 126

Query: 124 SAEAGGLPWVYLQKSLLLGLCVSLI-LQGLCELYRHGKALFG 164
           S++AGGL  +     LLL +  SL+ LQG+ EL +    L G
Sbjct: 127 SSDAGGL--IRWPVKLLLPVGFSLLMLQGVSELIKKIAILTG 166