Pairwise Alignments

Query, 203 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 208 a.a., trimeric intracellular cation channel family protein from Pectobacterium carotovorum WPP14

 Score =  192 bits (489), Expect = 3e-54
 Identities = 93/195 (47%), Positives = 128/195 (65%)

Query: 3   LWLIGILAEAMTGALAAGRKQMDLFGVVIIGLVTAIGGGTLRDMLLGNYPLIWIANWHYL 62
           ++LI I AE M+GALAAGR+ MD+FGV +I  +TA+GGGT+RD+LLGNYP+ W  +  Y+
Sbjct: 5   IYLIAITAEGMSGALAAGRRNMDIFGVGMIAFITALGGGTVRDILLGNYPIGWTQHPGYI 64

Query: 63  IAIAAASLLTVLIAPLMRYLGRLFLAIDALGLAVFSITGAQKTLMLGYSPVVAVAMGVVT 122
                A L T++IA  M +L RLFL +DA+GL  F++ G    L L YS  V V  G+VT
Sbjct: 65  YLTIGAGLFTIIIARFMHHLHRLFLVLDAMGLIAFTVIGCNVALQLNYSTTVVVMAGIVT 124

Query: 123 GVFGGVLRDILCNEIPLIFRREFYALASLLTASLYVLLALSGFGGWPSLLGCLLLGFGLR 182
           G+FGG+LRDI CN  P++ ++E YA  SLL A LY+ L         +LL    +G  +R
Sbjct: 125 GIFGGILRDIFCNRTPMVLKKELYASVSLLVALLYLGLKSLNVNHDINLLTSFSIGLAVR 184

Query: 183 MCAIRYHWSMPTFNY 197
           + AIR+ W +P F+Y
Sbjct: 185 LAAIRWSWQLPVFSY 199



 Score = 33.1 bits (74), Expect = 4e-06
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 19/105 (18%)

Query: 1   MLLWLIGILAEAMTGALAAGRKQMDLFGVVIIGLVTAIGGGTLRDMLLGNYPLIWIANWH 60
           ++L  +G++A  + G   A +       VV+ G+VT I GG LRD+     P++     +
Sbjct: 89  LVLDAMGLIAFTVIGCNVALQLNYSTTVVVMAGIVTGIFGGILRDIFCNRTPMVLKKELY 148

Query: 61  YLIAIAAASLLTVLIAPLMRYLGRLFLAID---------ALGLAV 96
                A+ SLL  L+     YLG   L ++         ++GLAV
Sbjct: 149 -----ASVSLLVALL-----YLGLKSLNVNHDINLLTSFSIGLAV 183