Pairwise Alignments

Query, 203 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 219 a.a., trimeric intracellular cation channel family protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  141 bits (356), Expect = 8e-39
 Identities = 73/189 (38%), Positives = 109/189 (57%), Gaps = 2/189 (1%)

Query: 7   GILAEAMTGALAAGRKQMDLFGVVIIGLVTAIGGGTLRDMLLGNYPLIWIANWHYLIAIA 66
           G+   A TGALAA R++ D+      G +T +GGGTLRD+LLG  P+ W+ +W YL    
Sbjct: 26  GVAVFAATGALAAAREKHDVVTFAFFGAITGVGGGTLRDLLLG-LPVFWVQDWRYLAVCL 84

Query: 67  AASLLTVLIAPLMRYLGRLFLAIDALGLAVFSITGAQKTLMLGYSPVVAVAMGVVTGVFG 126
            AS    L+     +  R  L +DA+GLA + + GA K    G   ++ + MG +T  FG
Sbjct: 85  FASTALWLVGQ-RDWRFRALLWLDAVGLAAYGVMGAAKAEAAGAPALICIVMGTLTACFG 143

Query: 127 GVLRDILCNEIPLIFRREFYALASLLTASLYVLLALSGFGGWPSLLGCLLLGFGLRMCAI 186
           GV+RD L  +  ++ RRE    A++L A++Y++L   G G WP+ +   L GF LR  A+
Sbjct: 144 GVVRDTLAGQPSILLRREINVTAAILAATVYMVLRAPGVGVWPAAIVAALSGFLLRAAAL 203

Query: 187 RYHWSMPTF 195
           R+ W++P F
Sbjct: 204 RWGWTLPGF 212



 Score = 42.7 bits (99), Expect = 5e-09
 Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 88  AIDALGLAVFSITGAQKTLMLGYSPVVAVAMGVVTGVFGGVLRDILCNEIPLIFRREFYA 147
           A+D  G+AVF+ TGA       +  V     G +TGV GG LRD+L   +P+ + +++  
Sbjct: 21  ALDFAGVAVFAATGALAAAREKHDVVTFAFFGAITGVGGGTLRDLLLG-LPVFWVQDWRY 79

Query: 148 LASLLTAS 155
           LA  L AS
Sbjct: 80  LAVCLFAS 87



 Score = 39.3 bits (90), Expect = 5e-08
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 2/78 (2%)

Query: 2   LLWL--IGILAEAMTGALAAGRKQMDLFGVVIIGLVTAIGGGTLRDMLLGNYPLIWIANW 59
           LLWL  +G+ A  + GA  A          +++G +TA  GG +RD L G   ++     
Sbjct: 103 LLWLDAVGLAAYGVMGAAKAEAAGAPALICIVMGTLTACFGGVVRDTLAGQPSILLRREI 162

Query: 60  HYLIAIAAASLLTVLIAP 77
           +   AI AA++  VL AP
Sbjct: 163 NVTAAILAATVYMVLRAP 180