Pairwise Alignments

Query, 517 a.a., proton/peptide symporter family protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 485 a.a., Dipeptide and tripeptide permease C from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  112 bits (280), Expect = 3e-29
 Identities = 130/506 (25%), Positives = 214/506 (42%), Gaps = 53/506 (10%)

Query: 5   TGQWPKQIPYIIASEACERFSFYGMRNILTPFLMTALLLSVPEHLRAGEAKDVFHSFVIG 64
           T   P+ I YI+A +  E FSFYGMR +L  +L   L            A  +F ++   
Sbjct: 3   TPSQPRAIYYIVAIQIWEYFSFYGMRALLILYLTHQLGFD------DNHAISLFSAYASL 56

Query: 65  VYFFPLLGGWIGDRLFGKYNTILWLSLLYCVGHAFLAIFEDSKTGFYTGLFLIALGSGGI 124
           VY  P+LGGW+ DRL G    ++  +LL  +GH  L I  +S    Y  L +I  G G  
Sbjct: 57  VYVTPILGGWLADRLLGNRTAVIAGALLMTLGHVVLGIDTNSTFSLYLALAIIICGYGLF 116

Query: 125 KPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKHFGAAVAFGIPGV 184
           K  +S  +G+ +D+ N       F + Y   N GS  A ++  L  + +G  V F + G 
Sbjct: 117 KSNISCLLGELYDE-NDHRRDGGFSLLYAAGNIGSIAAPIACGLAAQWYGWHVGFALAGG 175

Query: 185 LMFIATVFFWAGRHRYVHMPPEPKNPNGFLPVIKTALLSPGANRFGLALALMGTVLAVIA 244
            MFI  + F +G HR+               + K AL S    +F L +     V+  +A
Sbjct: 176 GMFIGLLIFLSG-HRHFQSTRS---------MDKKALTSV---KFALPVWSWLVVMLCLA 222

Query: 245 LGFMPSL--GLVTSLCLALVLLMGFVGSGASMQLDRARARHGDEAVEGVRAVMRILVLFA 302
             F   L     +   LA+V L+            +  AR   +  E  RA+ +I++L  
Sbjct: 223 PVFFTLLLENDWSGYLLAIVCLIA----------AQIIARMMIKFPEHRRALWQIVLLMF 272

Query: 303 LVTPFWSLFDQKASTWILQANEMTKPEWFE----PAMMQALNPLLVMILIPFNNFVLYPT 358
           + T FW L  Q  ST  L  +     + F      A+ Q++N + VM+      ++  P 
Sbjct: 273 VGTLFWVLAQQGGSTISLFIDRFVNRQAFNIEVPTALFQSVNAIAVMLAGVVLAWLASPE 332

Query: 359 LERWGFRLTALGKMASGIAFSGLSWVVIG--SIQLMMDGGSAVSIVWQVLPYALLTFGEV 416
             R    L    K A G+      ++++   +     DG +++ ++  +   AL+ F E+
Sbjct: 333 -SRGNSTLRVWLKFAFGLLLMACGFMLLAFDARHAAADGQASMGVM--ISGLALMGFAEL 389

Query: 417 LVSATGLEFAYSQAPK-TMKGTIMSFWTLSVTVGNLWVLLANASVKGQGMTDWIAGTGLS 475
            +       A +Q  +  M G +   + L+      W+    A V  Q  T+    +G++
Sbjct: 390 FIDPV----AIAQITRLKMSGVLTGIYMLATGAVANWL----AGVVAQQTTE-SQISGMA 440

Query: 476 VTAFQMFF--FAGFALVAAAVFALYA 499
           + A+Q FF     + L   A+  + A
Sbjct: 441 IAAYQRFFSQMGEWTLACVAIIVVLA 466