Pairwise Alignments

Query, 517 a.a., proton/peptide symporter family protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 500 a.a., Dipeptide and tripeptide permease A from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  129 bits (323), Expect = 3e-34
 Identities = 117/447 (26%), Positives = 195/447 (43%), Gaps = 38/447 (8%)

Query: 9   PKQIPYIIASEACERFSFYGMRNILTPFLMTALLLSVPEHLRAGEAKDVFHSFVIGVYFF 68
           PK    I + E  ERF +YG++ I+  +L+  L +S  + +       +F SF   VY  
Sbjct: 20  PKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSIT------LFSSFSALVYGL 73

Query: 69  PLLGGWIGDRLFGKYNTILWLSLLYCVGHAFLAIFEDSKTGFYTGLFLIALGSGGIKPLV 128
             +GGW+GD++ G    I+  +++  +G+A +A         Y G+  IA+G+G  K   
Sbjct: 74  VAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMAAIAVGNGLFKANP 133

Query: 129 SSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKHFGAAVAFGIPGVLMFI 188
           SS +   +++++  L   AF M+Y ++N GSFF+ ++ P L   +G +VAF +  V + I
Sbjct: 134 SSLLSTCYEKNDPRL-DGAFTMYYMSVNIGSFFSMIATPWLAAKYGWSVAFALSVVGLLI 192

Query: 189 ATVFFWAGRHRYVHMPPEPKNPNGFLPVIKTALLSPGANRFGLALALMGTVLAVIALGFM 248
             V F A   R+V       +   F P+          N   L L ++G V  +    ++
Sbjct: 193 TIVNF-AFCQRWVKQYGSKPD---FEPI----------NYRNLLLTIIGVVALIAIATWL 238

Query: 249 PSLGLVTSLCLALVLLMGFVGSGASMQLDRARARHGDEAVEGVRAVMRILVLFALVTPFW 308
                V  + L +V     V  G      +  AR           V  IL+L A++  F+
Sbjct: 239 LHNQEVARMALGVVAFGIVVIFGKEAFTMKGAARRK-------MIVAFILMLEAII--FF 289

Query: 309 SLFDQKASTWILQANEMTKPEWF----EPAMMQALNPLLVMILIPFNNFVLYPTLERWGF 364
            L+ Q  ++    A    +        EP   QALNP  ++I  P    +L     + G 
Sbjct: 290 VLYSQMPTSLNFFAIRNVEHSILGLAVEPEQYQALNPFWIIIGSP----ILAAIYNKMGD 345

Query: 365 RLTALGKMASGIAFSGLSWVVIGSIQLMMDGGSAVSIVWQVLPYALLTFGEVLVSATGLE 424
            L    K A G+     +++++            VS+ W V  Y L + GE+++S  GL 
Sbjct: 346 TLPMPTKFAIGMVMCSGAFLILPLGAKFASDAGIVSVSWLVASYGLQSIGELMISGLGLA 405

Query: 425 FAYSQAPKTMKGTIMSFWTLSVTVGNL 451
                 P+ + G IM  W L+    NL
Sbjct: 406 MVAQLVPQRLMGFIMGSWFLTTAGANL 432