Pairwise Alignments

Query, 517 a.a., proton/peptide symporter family protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 489 a.a., Dipeptide and tripeptide permease B from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  103 bits (258), Expect = 1e-26
 Identities = 109/455 (23%), Positives = 187/455 (41%), Gaps = 42/455 (9%)

Query: 1   MTTTTG----QWPKQIPYIIASEACERFSFYGMRNILTPFLMTALLLSVPEHLRAGEAKD 56
           M TTT     Q P+    I   E  ERF +YG++ +L  F +  L  S  +      A  
Sbjct: 1   MNTTTPMGMLQQPRPFFMIFFVELWERFGYYGVQGVLAVFFVKQLGFSQEQ------AFV 54

Query: 57  VFHSFVIGVYFFPLLGGWIGDRLFGKYNTILWLSLLYCVGHAFLAIFEDSKTGFYTGLFL 116
            F +F   VY    +GG++GD L G   TI+  +L+  +G+    +        +  L  
Sbjct: 55  TFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGALVLAIGYFMTGMSLLKPDLIFIALGT 114

Query: 117 IALGSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKHFGAA 176
           IA+G+G  K   +S +   +   +  L   AF +FY +IN GS  A    P++   FG +
Sbjct: 115 IAVGNGLFKANPASLLSKCYPPKDPRL-DGAFTLFYMSINIGSLIALSLAPVIADRFGYS 173

Query: 177 VAFGIPGVLMFIATVFFWAGRHRYVHMPPEPKNPNGFLPVIKTALLSPGANRFGLALALM 236
           V + + G  + IA + + A R     +  EP     F P+  + LL            L+
Sbjct: 174 VTYNLCGAGLIIALLVYIACRGMVKDIGSEP----DFRPMSFSKLL----------YVLL 219

Query: 237 GTVLAV-IALGFMPSLGLVTSLCLALVLLMGFVGSGASMQLDRARARHGDEAVEGVRAVM 295
           G+V+ + +    M ++ +   + + L +++  +    + +LD+           G   + 
Sbjct: 220 GSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFRQAFKLDKT----------GRNKMF 269

Query: 296 RILVLFALVTPFWSLFDQKASTWILQANEMTKPE----WFEPAMMQALNPLLVMILIPFN 351
              VL      F+ L+ Q  ++    A      E       P   QALNP  V++  P  
Sbjct: 270 VAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVLASPIL 329

Query: 352 NFVLYPTLERWGFRLTALGKMASGIAFSGLSWVVIGSIQLMMDGGSAVSIVW-QVLPYAL 410
             + Y  L   G  L+   K   G+    L ++   +  +       ++  W  VL Y  
Sbjct: 330 AGI-YTHLGNKGKDLSMPMKFTLGMFMCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLF 388

Query: 411 LTFGEVLVSATGLEFAYSQAPKTMKGTIMSFWTLS 445
            + GE+ +SA GL    +  P+ + G I+  W L+
Sbjct: 389 QSLGELFISALGLAMIAALVPQHLMGFILGMWFLT 423